Bacillus pumilus SAFR-032: BPUM_0072
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Entry
BPUM_0072 CDS
T00599
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bpu
Bacillus pumilus SAFR-032
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_0072
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BPUM_0072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
SLFN-g3_helicase
AAA_22
nSTAND3
AAA_16
GvpD_P-loop
AAA_24
ATPase_2
AAA_5
AAA_30
NTPase_1
NPHP3_N
AAA_14
AAA
RecA
ABC_tran
KTI12
Elong_Iki1
AAA_19
divDNAB
KdpD
ATP-synt_ab
NACHT
Isochorismatase
DAP3
DUF7129
ArsA_ATPase
MCM
Zeta_toxin
DZR
AAA_31
HypA
Motif
Other DBs
NCBI-ProteinID:
ABV60772
UniProt:
A8F955
LinkDB
All DBs
Position
104253..105632
Genome browser
AA seq
459 aa
AA seq
DB search
MAKTKSKFICQSCGYESAKWMGKCPGCGTWNSMTEEVVRKEPANRRSAFNHSVQTIQKPS
PISAIETSDEPRIKTNLEEFNRVLGSGIVKGSLVLIGGDPGIGKSTLLLQVSAQLSDKNQ
NVLYISGEESIKQTKLRADRLGIKSTSLHVLAETDMEYITSAIQEMKPAFVVVDSIQTVY
QSDITSAPGSVSQVRECTAQLMKIAKTNGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYF
EGERHHTFRILRAVKNRFGSTNELGIFEMREEGLTEVLNPSEIFLEERSAGVSGSCVVAS
MEGTRPVLVEIQALISPTSFGNPRRMATGLDHNRVSLLMAVLEKRVGLLLQNQDAYLKVA
GGVKLDEPAIDLAIAVSIASSFKDAAPHQADCFIGEVGLTGEVRRVSRIEQRVQEAAKLG
FKRMFIPQANIDGWKKPRGIELVGVENVAEALRISLGGS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctaagacgaaatcaaaatttatatgccaatcgtgcggttatgagtcagccaaatgg
atggggaaatgtccaggctgcggcacgtggaacagtatgacagaagaggtcgttcgtaaa
gagccagcaaaccgtcgaagcgcttttaaccattctgttcaaaccattcaaaaaccttca
cctatatctgcaattgaaacatcagatgaaccccgaatcaaaacgaatttagaagaattt
aatcgagtattaggaagtggaattgtcaaaggctctcttgttctcattggcggagatcct
gggattgggaagtccactttattattacaagtatcagcacagctctcagataaaaatcag
aatgtattatacatatctggtgaggagtccattaaacaaacgaagctaagagcggaccgc
ctcggcataaaaagcacctctttacatgttttggctgaaaccgatatggagtatataacg
tctgctatacaagagatgaaacccgcttttgtcgtggtggattcgattcaaaccgtttat
caaagcgatattacgtcagctcctgggtctgtatctcaagtgagagaatgtacagcacag
ctgatgaagattgcaaagacaaatgggattccaatttttatcgttggtcacgtgaccaaa
gaaggctcgatcgcaggcccacgtcttttagagcatatggtggacacggttctttatttt
gaaggcgagcgtcatcatacgtttcgtatcttacgtgcggtgaaaaaccgatttggctcg
acgaatgaactagggatttttgaaatgagagaggaagggctcacggaagtattaaaccca
tccgaaattttcttagaagaacgttcggcaggtgtatcgggttcgtgtgtcgttgcctca
atggaaggaacaagacctgttctagtcgagatacaagcattaatttcaccgacaagcttc
ggaaatccgcgtagaatggccactggtcttgatcataatcgagtgtcactactcatggcg
gttttagaaaaacgtgttggactgcttctgcaaaaccaggatgcgtatttaaaggtcgca
ggcggtgtgaagcttgacgaaccagcaattgacttggccattgcggtcagcattgcatca
agctttaaagacgcagcgccgcatcaagcggattgctttataggagaggtcggcctgacg
ggagaagtcagaagagtatcaagaattgaacagcgtgtgcaggaagctgcgaaactagga
tttaaacgaatgtttattcctcaggcaaatatagatggatggaaaaagccgagagggatt
gagttagtcggtgtagaaaatgtagcggaggcacttcgaatttcactagggggatcatag
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