Bacillus pumilus SAFR-032: BPUM_0093
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Entry
BPUM_0093 CDS
T00599
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bpu
Bacillus pumilus SAFR-032
Pathway
bpu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BPUM_0093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpu03021
]
BPUM_0093
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_0093
Enzymes [BR:
bpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BPUM_0093
Transcription machinery [BR:
bpu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BPUM_0093
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BPUM_0093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ABV60793
UniProt:
A8F976
LinkDB
All DBs
Position
120124..123705
Genome browser
AA seq
1193 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGDPKYPVAESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFSSDQEILDLIGENEYLRNTLEKDNTENADKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQKLAETLVDPETG
EILAEKGQILDRRVLDKVLPYLENGIGFRKLYPNGGVVEDEVELQSIKIYAPSDQEGEQV
INVIGNAYVEEAVKNITPSDIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRF
GFIETPYRRVDPETGKVTPRIDYLTADEEDNYVVAQANALLADDGSFIDDNIIARFRGEN
TVVPRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPESPIVGT
GMEYVSGKDSGAAVICRYPGVVERVEAKNIWVRRYEDVDGQQVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMEKGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSGDEEEIEMRDLEDDEETKKADGLALSNDEDAADLAPVDLERDAVTKE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctacgcacgcata
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagatatatccccaattgaggattttactggt
aacctttctcttgaattcattgattacagcctaggggatcctaagtatcctgtagcagaa
tcaaaagaacgtgatgtaacttactctgctccactaagagtaaaagttcgtttaattaac
aaagaaactggagaagtaaaagaccaagatgtgttcatgggagatttcccaatcatgaca
gacacaggtacttttatcattaacggtgcggaacgtgtaatcgtttctcagttagtacgt
tctccaagtgtatatttcagtggtaaagtagacaaaaacggtaaaaaaggttttactgcg
actgtcattccaaaccgtggcgcatggttagaatacgaaactgatgcgaaggatgtagtc
tatgtacgcatcgatcgcacacgtaagttgccggttacggttcttttgcgtgctctcggc
ttcagctctgatcaagagattcttgacctcattggcgagaatgaatacttacgcaacacg
ctggaaaaagacaatacagagaatgcggataaagcacttctcgaaatctacgagcgcctc
cgtcctggagagccaccaactgttgaaaatgcgaaaagcttgctagactctcgcttcttc
gatccgaagagatatgacctagcaaatgttggacgctacaagattaataaaaagcttcat
attaaaaatagactgttcaatcaaaaattggctgaaacgttagttgaccctgaaacaggt
gaaattctagcagaaaaaggtcaaattttagacagaagagttcttgataaagttcttcca
tacttagaaaacggcatcggatttagaaagctttatccaaatggtggcgtagtagaagat
gaagtagaacttcaatctattaagatttatgcaccgtctgatcaagaaggcgagcaagtg
atcaacgtgatcgggaatgcatacgtagaggaagctgtgaaaaacatcacgccttctgac
atcattgcatcgatcagttacttcttcaaccttcttcatggtgtaggtgatacagatgat
atcgatcaccttggtaaccgtcgcctgcgttctgtaggtgagcttctgcaaaaccaattc
cgtattggattaagcagaatggagcgtgttgttcgtgaaagaatgtcgatccaagacaca
aacacgatcacacctcagcaactgatcaacattcgtcctgtgatcgcttctattaaagag
ttctttggtagctctcagctttctcagttcatggatcaaacaaacccgcttgctgaattg
acgcacaaacgtcgtctatcagcgcttgggcctggtggtttgacacgtgagcgtgcagga
atggaagttcgtgacgttcactactctcactatggtcgtatgtgtccgattgaaacacca
gagggtccaaacattggtttgatcaactctctatcttcatttgcaaaagtaaatcgtttc
ggctttattgaaacaccttaccgtcgggttgatcctgaaacaggtaaagtgacgccgaga
atcgactacttaactgctgatgaagaggataactacgtagtagcacaagcgaacgctctt
ctagctgatgatggttcgtttatcgatgataatatcattgctcgtttcagaggggaaaac
accgttgttcctcgaaaccgcgttgactacatggacgtttcgccaaagcaggttgtttct
gcagcgacagcatgtatcccattcttagagaacgatgactcaaaccgtgctctaatggga
gcgaacatgcaacgtcaggctgtgcctttgatgcagccggaatcaccgattgttggtaca
ggtatggagtatgtatcaggtaaagactctggtgctgctgtcatctgccgctacccaggt
gttgtagaacgtgttgaagcaaaaaatatttgggttcgccgttatgaagatgttgacgga
caacaagtcaaaggaaacctagacaaatacagcttgctgaaatttgtccgctctaaccaa
gggacttgctacaaccaacgtccaatcgtaagtgttggagatgaagtcgtaaaaggagaa
atccttgcagacggtccttcaatggaaaaaggtgaattggctctaggacgtaacgtcatg
gttggcttcatgacttgggacggttataactacgaggatgcgatcatcatgagtgagcgc
cttgtaaaagatgacgtctacacgtctattcatattgaagaatatgaatcagaagctcgt
gatacaaagcttggaccggaagaaatcactcgtgatattccaaacgttggggaagatgct
ttacgcaaccttgacgagcgtggaatcatccgtatcggtgcagaagtaaaagacggagac
cttcttgtaggaaaagtaacgcctaaaggtgtaacagaactaacagctgaagaacgtcta
ttacatgcaatcttcggtgaaaaggctcgtgaagtacgtgatacgtctctacgtgttcca
cacggcggcggcggaattatccacgacgtcaaagtctttaaccgtgaagatggagatgaa
ttacctccgggtgttaaccagttagtccgcgtatacatcgttcagaagcgtaaaatttct
gaaggtgataaaatggccggacgacatggtaacaaaggggttatctctaaaatccttcca
gaagaagatatgccgtatcttccagatggaacaccgattgatatcatgttaaaccctcta
ggggtaccatctcgtatgaacatcggtcaggtacttgagcttcatatgggtatggctgca
cgttaccttggcatccacattgcatcaccagtatttgatggtgcacgcgaggaagatgtt
tgggaaacgcttgaagaagcaggtatgtctcgtgatgcgaaaacagtcctttatgacggt
cgaactggtgaaccattcgataaccgtgtatcagtcggaatcatgtacatgatcaaactg
gctcacatggttgacgataaacttcacgctcgttcaactggaccatactcacttgttacg
cagcagccacttggcggtaaagcacagtttggtggtcagcgtttcggagagatggaagta
tgggcacttgaagcttacggtgcagcatacacacttcaagagatcttaaccgttaaatcg
gatgacgtggtgggtcgtgtgaaaacatacgaagccatcgtcaaaggggataacgtccct
gaaccaggtgtccctgaatcattcaaagtgttaattaaagaacttcaaagtttaggtatg
gatgtcaaaatcctatctggcgatgaagaagagatagaaatgagagatttagaagacgat
gaggaaacgaagaaagcagacggattagcgttatctaatgacgaagatgctgcagacctc
gctcctgtcgatcttgaacgtgacgcagtcacaaaagaatag
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integrated database retrieval system
