Bacillus pumilus SAFR-032: BPUM_0446
Help
Entry
BPUM_0446 CDS
T00599
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
bpu
Bacillus pumilus SAFR-032
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpu03021
]
BPUM_0446
Transcription machinery [BR:
bpu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPUM_0446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
DUF134
HNF-1_N
HTH_3
GerE
DUF1492
HTH_23
IF2_N
TnsD
NirdL-like_HTH
Phage_rep_O
Sigma70_ECF
KORA
HTH_28
UPF0122
Spectrin_7
Motif
Other DBs
NCBI-ProteinID:
ABV61141
UniProt:
A8FA74
LinkDB
All DBs
Position
509455..510243
Genome browser
AA seq
262 aa
AA seq
DB search
MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLR
QVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKTWSVHVPRRIKELGPRIKM
AVDHLTTETQKSPKVQEIAEYLDVTEEEVLETMEMGKSYQALSVDQGVEADSEGSTVTIL
DVVGSQEEGYERVNQKMMLESVLHVLTDREKEIINLTYLQNKSQKETGDLLGISQMHVSR
LQRKAVKKLRDALSEDASMELG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaccatccaaaactatgaaactaactaaagatgaagtggatcgccttatccaa
agctatcaatccaatcaagatgagcaggcgcagctcacgctggtcgaatgctatacaaac
ttggtcgatatgctggcaaaaaaatattcaaaaggaaaaagctttcatgaggatctcaga
caagttggaatgattggtttacttggcgccattaagcgatatgatccgctcgtcggtaaa
tcatttgaagcctttgctattccaaccattatcggggaaatcaaacgctttttacgggat
aaaacatggagtgtccatgtaccaaggcgaatcaaagagcttggaccaagaatcaagatg
gccgttgatcatctaacaacagagacgcaaaagtcaccgaaagtccaagagattgcagaa
tacctagatgtgacagaggaagaagttctggaaaccatggagatgggcaaaagctatcaa
gcactgtctgttgaccaaggcgtagaggctgattctgaaggaagtacagtcaccatttta
gacgttgtcggctcacaagaagagggctacgagcgtgtaaaccaaaaaatgatgcttgag
agtgtgcttcatgttctgacagatcgagaaaaagagattatcaacctgacttatttacaa
aataagagtcagaaagaaacaggcgatttattagggatatcccaaatgcatgtatcgaga
ctgcaacggaaggcagttaaaaagctacgagatgcattatcagaagatgcgtctatggag
ctagggtaa
DBGET
integrated database retrieval system
