Bacillus pumilus SAFR-032: BPUM_0625
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Entry
BPUM_0625 CDS
T00599
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpu
Bacillus pumilus SAFR-032
Pathway
bpu03420
Nucleotide excision repair
bpu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BPUM_0625
03430 Mismatch repair
BPUM_0625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_0625
Enzymes [BR:
bpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BPUM_0625
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPUM_0625
MMR (mismatch excision repair)
Other MMR factors
BPUM_0625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Terminase_6N
ChuX_HutX
ResIII
DUF3641
Motif
Other DBs
NCBI-ProteinID:
ABV61317
UniProt:
A8FAQ0
LinkDB
All DBs
Position
663167..665389
Genome browser
AA seq
740 aa
AA seq
DB search
MNEISNHLLEGLNDAQKEAVKATDGPLLLMAGAGSGKTRVLTHRIAYLMAEKHVAPWNIL
AITFTNKAAREMRERVQAILGPGADDIWISTFHSMCVRILRRDIDRIGVNRNFSILDTSD
QLSVIKNILKERNIDPKKFDPRSILGSISSAKNELIDAEEYAKTAGDFYDQVVSDVYTDY
QKRLLKNQSLDFDDLIMMTIRLFERIPEVLEHYQRKFQYIHVDEYQDTNRAQYMLVKLLA
QRFQNICVVGDSDQSIYRWRGADITNILSFEKDYPSSEVILLEQNYRSTKRILNAANTVI
QNNSNRKPKNLWTENDEGAKIAYYRADNEFGEGQFVAGKIHQLHQSGKRKLSDFAILYRT
NAQSRVIEETLLKSNIQYNIVGGTKFYDRKEIKDILAYLRLVANPDDDISFARIVNVPKR
GIGATSVDKIAAYAEMNDLSMFEALAQVDFIGLSARAANALDEFKQLIDQMTNMQDYLSV
TELTEEILEKTGYREALKVEKTIEAQSRLENIDEFLSVTKNFEEQNEDKSLVTFLTDLAL
VADIDKLDENEEEDQDAVILMTLHAAKGLEFPVVFLMGMEEGVFPHSRSLMEDAEMEEER
RLAYVGITRAEEELYLSSAKMRTLFGRTNMNLESRFIREIPADLLDNLNEKKETKTPFGQ
TRERPQRRGPVSRPQTQTIQNTGGGSIGWAVGDKAAHKKWGVGTVVSVKGSGDSTELDIA
FPSPTGIKRLLAAFAPIEKQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatatcgaatcatctattagaagggttgaatgacgcgcagaaagaagcggtc
aaagcaacagacggtccgctactcttgatggcaggagcaggaagcggaaagacacgggtg
ctcacacatcgaattgcttatttaatggcagaaaagcatgtggctccgtggaacatttta
gcgattacgtttacaaataaagcagcacgtgaaatgcgtgagcgtgtacaagccatttta
gggcctggtgcggatgatatatggatctctacgttccacagcatgtgtgtgcgcatttta
cgacgcgatattgaccgtattggtgtaaatcgcaacttttctatattagacacatctgat
cagctttcagtcattaaaaacattttaaaagaacgaaatatcgatcctaaaaagtttgat
ccacgtagcattttaggttcaatcagtagtgcaaaaaacgaactcattgacgcagaggaa
tacgccaaaacagctggtgatttctatgatcaagtggtcagcgacgtctacacagattat
caaaaacgattactcaagaaccaatcacttgattttgatgatcttattatgatgacgatt
cgtctgtttgaacgcatccctgaagtattagaacactatcagcgaaaattccaatacatt
catgtcgatgagtatcaggatacaaacagagcgcagtacatgcttgtgaaactgctcgct
caacgttttcaaaatatatgtgtggtcggtgactcggatcagtccatctatcgctggcgc
ggagcggatattacaaacattctctcctttgaaaaagattatccgtccagtgaagtgatt
ttgcttgagcaaaattatagatcgactaaacgtattttgaatgctgcaaacacagtgatt
caaaacaattcaaaccgtaagccgaaaaatctttggacagaaaatgatgaaggagcgaag
attgcctattaccgtgcagataatgaattcggtgaaggacaatttgttgctggaaagatt
catcagcttcatcagagcggcaagcgtaaattatccgattttgcgattctttatcggacc
aatgcccagtctcgtgtcatagaggaaacgttattgaagtcaaacattcaatacaacatt
gtcggcggcacgaagttctatgacagaaaagagatcaaggacattttggcgtacttacgt
ctagtagctaacccagatgacgacattagctttgcacgaatcgttaacgtaccaaagcgc
ggaatcggtgcaacttctgttgataaaattgcggcatatgccgagatgaatgatctgtct
atgtttgaagcacttgctcaggtagatttcattggactcagtgcaagggcagccaatgcg
cttgatgaatttaaacagctcattgatcaaatgaccaatatgcaggattatttatctgtc
acagaactaacagaagaaattctagagaaaacaggctatcgtgaagcactaaaggttgaa
aaaacgattgaagcacaaagtcgtctagaaaatattgacgagtttctctctgtgactaag
aactttgaagaacaaaatgaagacaagtcccttgtgactttcctgacagaccttgccctt
gtcgcagacatcgataagctggatgaaaatgaggaagaagatcaggatgcggtcatttta
atgacgcttcacgccgcaaaaggtctagaattccccgttgtcttcttaatgggcatggag
gaaggtgtcttcccgcacagccgttcattaatggaagatgcggagatggaagaagagcgc
cgccttgcttatgtaggcatcacacgtgcggaagaagagctttatttatcaagtgccaag
atgagaacactcttcggccggacaaacatgaaccttgaatcaagattcattcgagaaata
ccagccgatttattggacaacctaaatgagaaaaaagaaaccaaaacaccatttggccaa
acaagagaacgaccgcaaagacggggacctgtctcacgtccgcaaactcaaaccattcaa
aacacaggcggcggaagtattggctgggctgtgggcgataaagcggctcataaaaaatgg
ggcgttggaacggttgtcagtgtaaaaggcagtggagacagtacagagcttgatattgcc
ttcccaagccctacaggcattaagcgtcttctcgcagcatttgcgccaattgagaagcaa
taa
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