Bacillus pumilus SAFR-032: BPUM_0994
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Entry
BPUM_0994 CDS
T00599
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bpu
Bacillus pumilus SAFR-032
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_0994
Enzymes [BR:
bpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BPUM_0994
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BPUM_0994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABV61678
UniProt:
A8FBR1
LinkDB
All DBs
Position
1076846..1080550
Genome browser
AA seq
1234 aa
AA seq
DB search
MQIPKPNNSTWTDDQWEAIVSEGQDILVAAAAGSGKTAVLVERLIRKMTRPEHPVDVDRL
LVVTFTNASAAEMKHRITEALEKELAKNPGSLHMRRQLSLMNRANISTLHSFCLQVLRTF
YYEIDLDPGFRLADQTEGELLGDEVLDELFEDEYKAGKPSFFELVDRYTSDRHDLDLQWL
VKRIYDFSRSHPSPEQWMRAFLSLYDVDAQTKVEELPFYPYIKEDLSLVLRSCQELLERA
LSLSKEPGGPAPRAENFIDDLEQVNELIRHQDDFEKLYELLPNVNFKRLKTCKGDEYDPV
LLEKATDARNQAKKQLEKLKDEYFMRSPAQHLKSLAEMKPIVETLVELVIQFGERFERAK
QEKSIVDFSDLEHYCLRILAEQDAEGHLIETEAAKYYQQQFEEVLVDEYQDTNLVQETIL
KLVSKGEHSSEGNLFMVGDVKQSIYRFRLAEPMLFLNKYKHFQPDGKETGKRIDLNKNFR
SRSDVLDSTNFLFKQLMGETVGEIEYDEQAELKLGASYPESKDTTTEMLLVHLDQQEAET
GEEREELETVQFEARIIAKKIKELVEQPFQVYDAKQQMTRNLQYRDIVILLRSMPWAPQM
MEELKKQGIPVYANLSSGYFEATEVSVILSLLKVIDNPYQDIPLAAVLRSPLVHLDENEL
ALIRTSDKKGTYYDAVKAFMSVTHSDHPTCKKLERFFQLLRKWRDFSINHSVAELIWEVY
RDTQYLDYVGGMPGGKQRQANLRALYDRAKQYEKAAFRGLFRFLRFIERMQERGDDLGAA
KTFSETEDVVRMMTIHSSKGLEFPVVFTVGLGRNFNMMDLNQSYLLDKELGFGSKYIHPE
LRISYATLPLVAMKKKMRKELLSEELRVLYVALTRAKEKLFLVGSVKNQVKALSKWQNAA
TGEEWLLPDFERYQSKTYLDFIGPALIRHQAMSSVLEETGDVVLSHPSTFTISFTQASDL
LKEDMSLEKKEQDEIVQALMDGLPVEGYGDADEKVAERLSWKYPYLAASQVGTKQSVSEI
KRMKEIQDEYSVPSSIRKARATLYDRPAFMKKKTLTAAEQGTAMHTVMQHIPLPSEEPYD
ESRIGHLLDSLQQRDLLTDEQVQSINQEGIAAFFSTSIGQKLLKADWVKREVSFSMVLPV
KEVYSHIDTEGEPVLIQGMIDCLFETDGKLYLLDYKTDRVQGRYTGGIDAAVPILKKRYE
TQIALYAKAVERLTNRTLEEKILYFFDGNVEISL
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataccaaaaccgaataacagtacgtggacggatgaccagtgggaagccatcgtt
tcagaaggacaagatatcttagttgcggcggcggcaggttcaggtaaaacagctgttttg
gttgaacgcctgattcgaaagatgacccggcctgaacatccagttgatgtcgatcgtctg
ctcgttgtgactttcacaaatgcatctgcagcagagatgaagcatcggatcacagaagca
cttgaaaaagaattagccaaaaatcctgggtctcttcatatgagaaggcagctgtccctc
atgaatcgagccaatatttcaaccttgcactccttttgcttacaggttttacggaccttt
tactatgaaattgatcttgatccaggcttccgtttggctgatcaaacagaaggagaacta
ttaggagatgaagtgttagacgaactgtttgaggatgaatataaggctgggaagccatca
ttctttgaattggttgatcgttacacgtctgaccgtcatgacttagatttgcaatggctc
gtgaagagaatctatgatttttcaagatctcatccttctccggagcaatggatgcgggca
ttcctttcactatatgatgtagatgctcaaacaaaagtagaagaattaccgttttatccc
tatatcaaagaagatctttcgctcgttctccggagctgccaggagctgcttgaacgagct
ctttcgctatcaaaagagcccggcggtccagcaccgagagcagagaattttatagatgat
ttagagcaagtcaatgaattaatccgtcatcaagatgattttgagaaactatatgagctt
ttaccgaacgtcaattttaaaaggcttaaaacgtgcaaaggggacgaatatgaccctgtt
ttattagagaaagctactgatgcacgtaatcaagcaaaaaaacaattagaaaaactaaaa
gatgagtacttcatgcgcagtcctgcccagcatttaaaaagcttagctgaaatgaagccg
attgtcgagacacttgtagagctagtgatccaatttggtgagcgcttcgaaagagcgaag
caggaaaagtctattgtcgatttttccgatttagagcactattgcttacgcattttagcg
gagcaggatgcagaaggacatttgatcgaaacagaagctgctaagtactatcaacagcag
tttgaagaagtgctcgttgatgaataccaggatacaaaccttgtacaagaaacaatttta
aaacttgtatctaaaggagaacattcttcagagggtaatctgtttatggttggtgatgtc
aagcagtctatttatcgttttagactggctgagcccatgctctttttaaacaaatataaa
cactttcaaccagacggcaaagaaacaggaaagagaatcgatttaaataaaaacttccgc
agccgttcagatgttttagatagtacgaactttttgttcaagcagctgatgggggaaaca
gttggagaaattgaatatgatgaacaagctgaattaaagcttggagcgagttatccagaa
agcaaagatacaacgacagaaatgcttcttgtccacttagatcagcaggaagcagaaacg
ggcgaagagcgagaagagctcgagaccgtccaatttgaagcgagaatcattgctaaaaaa
ataaaagaattagttgagcagccatttcaagtgtacgatgcaaagcagcaaatgacccgg
aacttgcagtatcgagacattgtcattttacttcggtctatgccgtgggctccgcaaatg
atggaggaattaaagaagcagggaatccccgtatatgcgaatctttcctctggttatttt
gaagcaacagaggtgtctgtcatcctttctttgttaaaagtgatcgataatccatatcag
gatatcccgcttgctgctgttttaagatcacctcttgttcatttagatgaaaatgagttg
gcactgattcggacgagtgataaaaaaggcacgtattatgatgctgtaaaggcctttatg
agtgtgactcattctgatcatcctacatgcaaaaagctagagcgatttttccaattactg
cgcaaatggcgtgatttctccatcaatcattcggtggcagaattaatttgggaagtctac
cgcgatacacagtatcttgattatgttggcggaatgcctggaggtaagcagcggcaagcg
aatcttcgtgccctttatgaccgggccaagcagtacgaaaaagctgcctttagagggcta
ttccgattccttcgttttattgaaagaatgcaggagcgtggggacgatcttggtgcggca
aaaacgttcagtgaaacagaggacgttgtgcgcatgatgacgattcatagtagtaaagga
ttagaattcccagtcgtctttaccgtaggacttggcagaaactttaatatgatggactta
aaccagtcttatttacttgataaagaactaggctttggaagcaagtatatccatcctgag
ctgagaattagttatgcgactttaccacttgtggcgatgaaaaaaaagatgagaaaagag
ttgttatctgaagagcttagagtgctttatgtggcgctcacaagggctaaagaaaaatta
tttctcgtcggctctgtcaaaaatcaggtgaaagcattaagcaaatggcaaaatgccgca
accggagaagagtggctgctcccagattttgaacggtatcaatcgaaaacatacttagat
ttcattggacctgccctcatccgtcatcaagcgatgtcatctgttttagaagaaacaggg
gatgttgttctttcgcatccgtctacattcactatctcatttacgcaagcttctgatctt
ttaaaggaagatatgtcacttgaaaagaaagagcaagacgagattgtacaagcattgatg
gatggtctacctgttgaaggatatggcgatgctgatgagaaggtggcagagaggctctcg
tggaaatatccgtatctagcggcctcacaagtcggcacaaagcagtctgtttccgagata
aaaagaatgaaagaaatacaggatgagtacagtgttccttcttctattcgaaaagctcgt
gcaacgttgtatgaccggccggctttcatgaagaaaaaaacactcactgccgcagaacaa
ggcaccgccatgcatacagtgatgcagcatatcccgcttccttctgaggagccctatgat
gagtcacgtataggacacttgctcgattctttacaacagcgagacctgctaacagatgag
caggttcagtcaattaatcaagagggaatcgctgctttcttctctacttcaattggtcaa
aaactgctaaaagcggactgggtgaaacgagaggtgtcatttagtatggtgttacctgtt
aaggaggtatacagtcatattgatactgagggagagcctgttctaattcaaggaatgatt
gactgtttatttgaaacagatggaaagctatatttactagattataaaactgatagagtt
caaggcagatatacaggtggaattgacgctgctgtaccaatcttgaaaaagcgttatgaa
acccaaatcgcgttatatgcaaaagcggtagagcgtttgacaaacagaacattagaggag
aaaattctttatttcttcgatggaaatgtagagatatctttataa
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integrated database retrieval system
