Bacillus pumilus SAFR-032: BPUM_0995
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Entry
BPUM_0995 CDS
T00599
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
bpu
Bacillus pumilus SAFR-032
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_0995
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BPUM_0995
Archaeal homologous recombinant proteins
BPUM_0995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
LUC7
Motif
Other DBs
NCBI-ProteinID:
ABV61679
UniProt:
A8FBR2
LinkDB
All DBs
Position
1080577..1081752
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AA seq
391 aa
AA seq
DB search
MRILHTADWHLGKTLEGRSRLDEQAQFLDELYQIVKDEHIDVIVMAGDAFDTVNPPARAE
QLFYESLSALSDKGKRQVVVISGNHDNPDRLSAASPLTNDQGIHLIGYPTNDIIRVDVPS
ADERLSIAALAYPSEARLNEVLAETFEEKLLRDHYNLKIQQAFQHLSTQFQPDTVNIATS
HIYVAGGSQTDSERPIEVGGAYTVAAESLPESACYVALGHLHRPQTIKRAKTIARYSGSP
LAYSFSESGYAKSVTIVEAKPNEKASWKEVFLSSGKPLMKWKATEGLSQVYEWLDEKRDL
QAWIDLEIHLTDQLSIEEIHQLRKQHSGFVHIRPKFKELQQIEEQKQVEKLSIEERFVKF
YERQTGGGLPDEKTVKLFLELANDMQEEEAT
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaggattctgcatacagcggattggcatttagggaaaacccttgaaggccgaagccgg
cttgatgagcaagcacagtttttagatgaactgtatcaaatcgtgaaagacgagcacatt
gatgtcattgtgatggctggtgatgcctttgatacagtgaatccgcctgctagagcagag
cagcttttttatgaaagcctatctgccttatctgataaaggaaaacgacaggtagtagtc
atttcaggaaaccacgataatccggatcgcttatcagctgcatcgcctttaacaaatgat
caagggattcatttaattggatatccgactaatgacatcattcgagtcgatgttccttct
gcggatgaacgtttatccattgcggcactcgcttatccgtctgaggcgaggctgaatgag
gtactggctgaaacatttgaagagaaattgcttcgtgatcattacaatttaaagattcaa
caagcgtttcaacatttaagtactcaatttcaaccggatacggtgaatatcgcaacaagc
cacatttatgtggctggaggaagtcaaacagattcagaaagaccgattgaagtaggcggc
gcatataccgttgcggctgaaagtctgccagaatccgcttgctatgttgcacttggtcat
ttgcacaggccgcaaacgatcaaacgtgccaaaacgattgctcgttattctggatcacca
cttgcttatagcttttctgaatcaggctatgccaaatcagtcacaattgtagaggcaaaa
ccgaatgaaaaagcaagctggaaagaagtgtttttatcgagcggaaagccacttatgaaa
tggaaggcgactgagggactgagtcaagtgtacgagtggttggatgaaaaacgggatctt
caggcatggattgatctagagattcatttaacagatcagctctctattgaagaaatccat
cagctccgaaagcagcatagtgggtttgttcatattcgtccaaaattcaaagaactacag
caaatagaagagcaaaagcaagtggaaaaactctcgatcgaagagaggttcgtgaagttt
tatgagcgccagacaggtggcggtttgcctgatgaaaaaacagtcaaactgtttttagag
ctagccaatgatatgcaagaggaggaagcgacttga
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