Bacillus pumilus SAFR-032: BPUM_0996
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Entry
BPUM_0996 CDS
T00599
Name
(GenBank) DNA repair exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bpu
Bacillus pumilus SAFR-032
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_0996
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BPUM_0996
Archaeal homologous recombinant proteins
BPUM_0996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
P_C
Motif
Other DBs
NCBI-ProteinID:
ABV61680
UniProt:
A8FBR3
LinkDB
All DBs
Position
1081749..1085144
Genome browser
AA seq
1131 aa
AA seq
DB search
MKPITLTIKGLHSFREEQTIDFSSLCDAGVFGIFGPTGSGKSSILDAMTLALYGKVERAL
NNTHGILNQAEEKLSVSFTFALQKEHHISYKVERAFKRADEMKVRTTLCRLIEIGDTQTV
LADKASEVNRKVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGADRRQMLQRLFNLEKYGD
QLVKRLRAKAQKHYGQKNELLAELNGLGEAGPEALAKAKEAAEQAKAIFHEKKQARDEAF
TAFTKAQAIWQYQKEQEAYETEQNKLNLLAPSIEEKKKKLHIAEQAETLKPYADALTKAE
KQLSQASQEKQEAEKQLLHQRTIYDQMAREYEQARQKKIETEPDLLKKKEQLIQLKEIER
KKEAALHEKTGIERQKNEKAQQLLQKKEEAENLQSLLERALTKQTQLNHELEQLQVSVKE
RKSVQDALRLSENVERINLSVQKEKQKLDELNKRALQTSEAYEKLQKQQNDHHEKIDQSF
QAIEHLYFYVCELERALTEWNQKVQHQKLEKLKQRDAVRAAELRKELAAELVDGEPCPVC
GSIHHDPKALESNNHDETVAQVDEIIQRMDQELKQAEAYGRGIYAAKQLLETHANQLVKQ
FSFLSQKAPGAEVAAAVETVQNSHSLQGLMQEWKGVKQDIQEVEQKRARLMDETHNQATE
MSKIKEQMTFEQQRIKELEVLIKELHAELSEQTTQFEQTFPHLTLNQVQDMQKQIDEKDQ
QAEGYKERIEKSISFLEEKQLAKEQLQTAIYNVEKELDKLAHQLESQQQLIQQYETDLGR
YPLKAASISDELIEVEHTLSLLNEKEQQSYKQLQHAQQLFSEAQSHFSSSERQLQEANRR
KQEAETSWEKEAESSPFHIPQDIESVSMEQVERQSVKQEIEEFEDKRKECAANLKRISEL
LKEESLDENQWTDIQHRKDAAEKALEEATAMNGSAHEHLRVIEENHQRFASIHERLEALQ
QEIDRLDKLQTVFKGNTFVEFLAEEQLESVSRDASARLSMLTRQRYAIEVDSEGGFVMRD
DANGGVRRPVSSLSGGETFLTSLALALALSAQIQLRGEFPLQFFFLDEGFGTLDQDLLDT
VITALEKLQSHNLAVGVISHVEELKMRLPKKLIVHPADPSGKGTTVSMELM
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccgattacgctgaccattaaaggacttcatagcttcagagaagaacaaacaatc
gactttagctctttatgtgatgcgggtgtgtttggcatatttggaccgactggaagtgga
aagtcgtccattttagacgccatgaccctagcactctatggaaaagtggagcgtgcgtta
aataatacacatggtattttgaaccaagcggaagaaaagctgtcggtttcctttacattt
gctttgcaaaaggaacaccacatttcttataaagtcgaacgtgctttcaaacgagcggat
gaaatgaaagtcagaacgactttatgccgcctaattgaaatcggtgatacgcagacagtt
ctcgcagataaagcgagtgaggtgaatcgtaaagtagaagaactactcggattaaccatt
gatgattttacccgtgcggttgttttaccacaagggaagtttgcagaatttctctcctta
aaaggggcagacagacgtcaaatgcttcagcgtttgttcaatttggaaaagtatggggat
caactcgtcaagcgtttgcgtgcaaaggctcaaaaacattatgggcaaaaaaatgaactg
ctggctgaactgaatggtctaggagaagctggtccagaggcgctggcgaaagcaaaggaa
gcagctgagcaggccaaggccatttttcatgagaaaaaacaagcgcgggacgaagcgttc
actgcttttacaaaggcgcaagcgatctggcagtatcaaaaggaacaagaagcttacgag
actgaacaaaacaagctgaatttactggcaccttcaatagaagagaaaaagaagaagctc
catatcgcagagcaggcagagacgctaaagccctatgcggatgcattgacaaaagctgaa
aaacagctttcacaagcatcgcaagagaaacaggaagcagaaaagcagctgctgcatcaa
cgaacgatctatgatcaaatggcgcgggagtatgagcaagcccggcaaaagaaaatagag
acagagccagaccttctcaaaaagaaagaacagctgattcagctaaaagaaattgaacgt
aaaaaagaggcagctcttcatgaaaagacgggcatagagcgccaaaaaaatgaaaaagcg
cagcagctcctccaaaagaaggaagaagcagagaatctccaatctctattagagcgtgca
ctaacgaaacaaacacaactgaatcatgagctggagcagttacaagtttcagtgaaagaa
cgcaaaagtgtacaggatgctttacgtttaagtgaaaatgtggaaagaataaacctcagc
gttcaaaaggaaaagcaaaagctggacgagctgaacaagcgagccttacagacttcagaa
gcatatgaaaagcttcaaaagcagcaaaacgaccatcatgaaaaaatagaccagtcgttt
caagcaattgaacacctctatttttatgtatgtgaactcgaacgagctctaacagaatgg
aatcaaaaagtacaacatcagaaacttgaaaaattaaaacagcgtgatgcggtaagggcg
gcagaattaagaaaagaattagcggcagagctagtagatggtgagccatgtcctgtttgt
gggtcgattcatcacgatccaaaggctttggaatccaataaccatgacgaaaccgtggca
caagtcgatgaaatcattcaacggatggaccaagagctgaagcaggcagaggcgtatgga
agaggtatatatgccgcaaagcagctcctcgaaacgcatgccaatcaattagtgaaacaa
ttttctttcttatctcaaaaagcccctggggcggaagtcgctgcagcagtagaaacggta
caaaattcgcactctttgcaggggttgatgcaagaatggaaaggcgtaaagcaagatatt
caagaggttgaacagaaacgggctcgtttaatggatgaaacgcataatcaagcaacagag
atgagcaagatcaaagagcaaatgacttttgaacagcagcgtatcaaagaattagaggtg
ctgatcaaagagcttcatgctgagctatcagagcaaacgactcaatttgaacagaccttc
ccgcaccttacattgaatcaagtacaagacatgcaaaagcaaatcgatgaaaaggaccaa
caagcggaaggctataaagaacgtattgagaaaagcatttcatttttggaagaaaaacag
ctagcaaaagagcagctgcagacagcgatatacaatgtcgagaaagaacttgataaacta
gcgcatcagctagaaagtcagcagcagcttatccaacaatatgaaacagatttaggccga
tatccattaaaagctgcctctatttctgatgaacttattgaggttgaacacaccctttct
cttcttaatgaaaaagagcaacaatcgtacaagcaattgcagcacgcgcagcagttgttt
agtgaggcgcaaagccatttttcaagcagtgagcgtcagcttcaagaggcgaacaggaga
aaacaagaagcagaaacatcatgggaaaaagaagcagaatcctctccttttcatataccg
caggacattgagtctgtttcaatggaacaggtagaacgtcaatcagttaaacaggaaatt
gaggaatttgaggataaaagaaaggaatgtgccgcaaacttaaagcgaatttctgaatta
ctgaaagaagagtcactggatgaaaaccagtggacagatattcagcacagaaaagatgca
gctgaaaaagcattggaagaagcgacagcaatgaatgggtcggcacatgaacacctgcgt
gtgatagaagagaatcatcagcgctttgcaagtattcacgaacgattggaagcattgcag
caagaaattgatcgccttgataaactgcaaactgtttttaaaggaaatacgtttgttgaa
tttttagcagaagaacagctggaaagtgtcagtcgtgatgcatccgcccgcttaagtatg
ttgacgagacaaagatatgcaattgaggtcgactcagaaggcggcttcgtgatgcgtgat
gatgcaaatggtggtgttaggcgtcctgtgtccagcttgtccggtggggaaaccttcttg
acatcgcttgctcttgctcttgctctttctgcacaaattcagctgagaggtgaattcccg
ttgcaattctttttccttgatgaaggatttggtacgctcgatcaagacttgcttgatacg
gtcattactgcattagagaagcttcagtctcacaatttagcagttggtgttatcagccac
gtggaagaattgaaaatgagactaccgaagaaactgattgtccatccagcagatccaagc
gggaaagggacaacggtctcaatggaattaatgtaa
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