Bacillus pumilus SAFR-032: BPUM_1470
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Entry
BPUM_1470 CDS
T00599
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bpu
Bacillus pumilus SAFR-032
Pathway
bpu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BPUM_1470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_1470
Enzymes [BR:
bpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BPUM_1470
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BPUM_1470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
SLFN-g3_helicase
Zn_ribbon_6
PIF1
Cas3-like_C_2
Helicase_C_2
AAA_16
HypA
Zot
IBR_1
Motif
Other DBs
NCBI-ProteinID:
ABV62153
UniProt:
A8FD36
LinkDB
All DBs
Position
1525270..1527678
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AA seq
802 aa
AA seq
DB search
MIAEVIVDVTTKAIDRPFDYRVPDRFKDLVKAGMRVVVPFGPRKIQGFVTKVKEETDVKT
GSIKDIVDLFDLSPVLTDELMELSHWLTEKTLSYHITALQSMLPAAMKAKYEKEIQVLSD
EELPQSLKELFGQRDSILYADIPAEQLKQIQKHVQKGHLEVRYHVSQKSGKKKVRMLQLA
ASKDKLEEKQQQLKKNAVKQKALLSFLLQASETTFLAKDLQQQTGASSQTLKTLIQEGLL
IESYEEVYRDPYRDRAFTPSASLDLMPEQAEAAKHIHQAVSDDRHETFLLHGVTGSGKTE
IYLQTIDHALQKGKEAIVLVPEISLTPQMVQRFKERFGSNVAVLHSGLSTGEKYDEWRKI
HRKEVKLVVGARSAVFAPFENLGMIIIDEEHESSYKQEEMPRYHAKDVAIERAKRHRCPV
VLGSATPSLETYARAQKGVFTLLTLKHRVNQQKLPHVSLIDMREELRNGNRSMFSEELML
RLKEVLERKEQAVLFLNKRGYSSFVMCRDCGYVEQCPHCEISLTYHRYQKRLKCHYCGHE
APVPEECPECHSEHIRYFGTGTQRVEEELTKVLPEARVIRMDVDTTSRKGAHEKLLTSFS
NKEADILLGTQMIAKGLDFPDVTLVGVLSADTSLHIPDFRSSEKTFQLLTQVSGRAGRHE
KAGSVIIQSYTPSHYSIELTKQHDYEAFYEQEMLHRRHQSYPPYYFLAMVTVSHEDVTKA
AHVTDQIVQFLKMNCAPNTRILGPAASPIAKIKDRYRYQCVIKYKRENELASLLRKIQDH
YQKEMEQKQLMISIDMNPYMMM
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgaagtcatcgtagatgtcacgacgaaagccattgatcggccattcgattac
cgtgtaccagatcgattcaaagatctcgtcaaagcgggaatgagggtggtcgttcccttt
ggcccgaggaagattcaagggtttgtgacaaaagtcaaagaagaaacagacgtaaaaaca
ggaagcataaaggacattgtcgatttatttgatttatcacctgttctgacagatgagcta
atggagctttcccactggctgacggaaaaaacattgtcctatcacataacggcacttcaa
tcgatgttgcctgcagccatgaaggcgaagtatgaaaaagaaattcaagtgctgtcagat
gaagaacttccgcagtcattgaaagagcttttcggtcagcgagatagcattctttacgct
gacattccagctgaacaactaaaacagattcaaaagcatgtccaaaaagggcatctagag
gtaaggtatcacgtctcgcaaaaatctggaaagaaaaaagtgcgcatgctccaactagca
gcttcgaaagataagcttgaagaaaagcagcagcagctgaagaaaaatgcggtcaaacaa
aaggcactgctctccttcttgcttcaagcgagtgagacgacctttttagcgaaagacttg
cagcaacaaacaggcgcgagttctcaaacgcttaaaaccttgattcaagaaggactgtta
atagaaagctatgaagaggtctaccgcgatccttatcgggaccgggcgtttacaccttct
gcctcacttgacctcatgcctgaacaagcagaagcggcaaaacatattcatcaagcagtc
agtgatgaccggcacgagacctttctgctgcacggggtaacaggaagcggtaaaacggaa
atatatttgcagacgattgatcatgctcttcaaaaaggaaaagaagcgatcgttcttgtt
ccagaaatctcgttaacccctcaaatggttcaacgatttaaagaacgatttggttcaaat
gtggctgtccttcacagcggcttatcgacaggagaaaaatatgatgaatggcggaaaatc
caccgcaaagaagtcaagcttgttgtaggcgcgagatcggcagttttcgcaccatttgaa
aatctaggcatgattatcatagatgaagagcatgaatcttcttataaacaagaggaaatg
cctcgttatcatgccaaggacgtcgccattgaacgagccaaaaggcatcgatgtccagtc
gttttaggcagtgcaaccccttcacttgaaacgtacgcgcgtgcccaaaaaggcgtgttt
acattgctgacgcttaagcaccgagtgaaccagcaaaagctgccgcacgtttcgttaatt
gatatgagagaagaattgagaaatggtaacaggtctatgttttcagaagaattaatgctc
agattaaaggaagtgcttgaaagaaaagaacaagccgtcttatttctgaataaaaggggt
tattcatcctttgtgatgtgccgtgattgcggatatgtggagcaatgcccccattgcgaa
atttctctcacctatcaccgctatcaaaaacgtctgaaatgccattattgcggtcacgaa
gcaccagtgccagaagaatgtccagaatgccatagtgagcatattcgctattttggtacg
ggtacgcagcgtgtagaagaagagctgacaaaagtactgccagaggcaagagtcattcga
atggatgtggatacaacgtctcgtaaaggtgctcatgaaaaactccttacatcttttagc
aataaagaagcggacatcttgctcgggacgcagatgattgcaaaagggttagatttccca
gatgtcacacttgttggagttctaagtgcggatacgtctcttcatattcctgatttccgt
tcaagtgaaaaaacatttcagctgctcacgcaggtcagcggcagggcaggacgacatgaa
aaagcgggctctgtcatcattcaatcgtatacgccttctcactatagtattgaattaacg
aagcagcatgactacgaagccttttatgaacaggagatgctgcatcgccgccaccagtct
tatccgccgtattactttttggcgatggtgactgtatcacatgaagatgtgacaaaggca
gcgcatgtcacggatcaaattgttcagtttctaaaaatgaactgtgcaccgaatacaaga
atccttggtccggctgcatcaccaatcgctaagatcaaagatagatatcgatatcaatgc
gtgataaaatacaaaagggaaaatgaactggcaagtttactacggaaaatacaagatcat
tatcaaaaggaaatggaacaaaaacaattgatgatttcaatagatatgaatccatatatg
atgatgtaa
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