Bacillus pumilus SAFR-032: BPUM_1510
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Entry
BPUM_1510 CDS
T00599
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bpu
Bacillus pumilus SAFR-032
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpu03032
]
BPUM_1510
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_1510
Enzymes [BR:
bpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BPUM_1510
DNA replication proteins [BR:
bpu03032
]
Prokaryotic type
DNA Topoisomerases
BPUM_1510
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BPUM_1510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
ABV62193
UniProt:
A8FD76
LinkDB
All DBs
Position
1564282..1566357
Genome browser
AA seq
691 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASMGHIRDLPKSQLGVDTEHDFEPRYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLSSDCRVVFNEITKDAIKD
SFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREN
EINEFKPEEYWTIDGTFLKGKESFEASFFGVNGKKHPLKTKEDVKEILSKLKGSKFSVEK
VTKKERKRNPAVPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGKEGTVGLITYMR
TDSTRISNTAIEEVSAFIDQTYGKNFLNTTKRTVKKNENAQDAHEAIRPTSTLRKPADVK
HVLSRDQLRLYKLIWERFVASQMAPAVLDTMSVDLDNNGLTFRANGSKVKFPGFMKVYVE
GKDDQLEEKDKMLPDLKEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALDNKRFIPTELGEIVLNLIIEFFPEIINVEFTAKMEKELDSVEEGT
IEWVRIIDSFYQDFAKRVEKAEAEMQEVEIEPEYAGVDCEECGHPMVYKMGRYGKFMACS
NFPDCRNTKPIVKDIGVKCPTCHEGNIVERKSKKRRIFYGCDRFPECEFVSWDKPIERKC
PKCENMLVEKKLKKGMQVQCVNCDYKEEQQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgattatttagtcatcgttgagtcgccagccaaggcgaaaacgattgagcgttat
ttaggtaaaaagtataaagtaaaggcttcaatgggacacataagagatttaccgaaaagt
cagcttggtgttgacactgagcatgacttcgaaccgaggtatattacgattcgcgggaaa
ggccccgtgttaaaagaattaaaaacagctgcgaaaaaagcaaagaaagtctatctcgca
gctgaccccgatagagagggagaagcgattgcttggcatttagcgcatagccttgacctt
gacctctcttctgactgccgcgttgtctttaatgagattacaaaagatgctattaaagat
tcctttaagcatccacgtatgatcaatatggatttagttgatgcacagcaggcaagacgg
atcttagatcgtctcgttgggtataaaattagtccgattttatggaagaaagtgaaaaag
ggcttaagtgccggtcgtgttcaatcagttgcactccgcctgatcattgatcgcgagaat
gaaatcaatgaatttaaaccagaagaatactggacaattgacggtacattcctaaaagga
aaagaaagcttcgaagcgagcttctttggcgtcaatggcaaaaagcatccactgaaaaca
aaagaagatgtaaaagaaatcctttcgaaactaaaagggagcaaattctccgtagagaaa
gtgacgaaaaaagagcgtaaacgcaacccagctgttccgtttacaacatctactttacag
caggaggctgcaagaaaattaaacttccgtgcgaaaaagacaatgatgattgcacagcaa
ttatatgaaggaattgatcttggtaaagaaggtacagtcggactcattacatacatgaga
acagactcaactcgtatttcgaatacggcgattgaagaagtatctgctttcattgatcag
acgtacggtaagaatttcttaaatacaacaaaacgaaccgttaaaaagaatgaaaatgca
caagatgctcacgaagccatcagaccgacctctacgctaagaaaaccagcagatgtcaaa
catgttttaagccgagatcagcttcgtttgtataaattgatttgggaacgattcgtcgca
agccaaatggcgccggctgttcttgatacaatgagtgtggatcttgataataacggactt
acattccgtgctaacgggagcaaagtgaaattccctggattcatgaaggtatatgtagaa
gggaaagacgaccagctagaagaaaaggacaaaatgttgcctgatctaaaagaaggtgat
acggttctttctaaagatatcgaacctgaacagcacttcacgcagccgcctccgcgctac
actgaggcaagacttgtcaaaactcttgaagagctaggtataggccgtccgtctacgtat
gcaccgacgttagatacgattcaaaagcgcggctatgttgcacttgataataaacggttt
atcccaacagagcttggggaaattgttctcaacttaatcattgaattcttccctgaaatc
attaatgtggaattcacggcgaaaatggaaaaagaacttgatagcgttgaagaaggtacg
attgaatgggttcgcattatcgacagcttctatcaagactttgcaaaacgggtcgaaaaa
gcagaagcagaaatgcaagaagttgaaattgagcctgaatacgccggagttgactgtgaa
gagtgtggacatccgatggtgtacaaaatgggtcgatacggtaagtttatggcttgctct
aactttcctgattgccgcaacacaaaaccaattgtgaaagacatcggtgtgaaatgccca
acatgtcatgaaggaaacattgttgaacgtaaatctaagaagcgccgcattttttatggc
tgtgatcgttttccagagtgcgaattcgtctcttgggacaaaccgattgaaagaaagtgt
ccaaaatgcgaaaatatgcttgtagagaaaaagctgaaaaaaggcatgcaagttcaatgt
gtgaactgtgattataaagaggaacaacaaaaatag
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