Bacillus pumilus SAFR-032: BPUM_1546
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Entry
BPUM_1546 CDS
T00599
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
bpu
Bacillus pumilus SAFR-032
Pathway
bpu02020
Two-component system
bpu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BPUM_1546
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BPUM_1546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpu03021
]
BPUM_1546
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bpu02035
]
BPUM_1546
Transcription machinery [BR:
bpu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPUM_1546
Bacterial motility proteins [BR:
bpu02035
]
Flagellar system
Flagellar assembly proteins
Stator
BPUM_1546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
TerL_ATPase
UPF0175
CT_C_D
PDZ_2
DUF7096
Motif
Other DBs
NCBI-ProteinID:
ABV62229
UniProt:
A8FDB2
LinkDB
All DBs
Position
1596992..1597759
Genome browser
AA seq
255 aa
AA seq
DB search
MQSLNYEDQALWARWKEWKDPAAGDDLMRRYMPLVTYHVGRISIGLPKSVHKEDLISLGM
LGLYDALEKFDPGRDLKFDTYASFRIRGAIIDGLRKEDWLPRTSREKTKKVEAAIEKLEQ
RYLRNVTPTEVAEELGMSEQDVVTTMNEGFFANLLSIDEKLHDQEDGENVQVMIRDEKTV
TPEEKMLKDELIEQLAEKMTELSEKEKLVISLFYKEELTLTEIGHVLNLSTSRISQIHSK
ALFKLKHLLDKAIQS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccttaaattacgaagatcaggcgctatgggctagatggaaagagtggaaggac
ccagctgctggagatgatcttatgcgccgctatatgccgctcgtcacatatcatgttgga
agaatttccatcggtctcccgaagtcagtgcataaagaagacttgatcagtctagggatg
ctcggtttatatgatgcccttgaaaaatttgaccccggaagagatctgaagtttgataca
tatgcatccttcagaatccgcggggccatcatcgacggtcttcgtaaagaggactggctg
cctcgtacatcaagagaaaagacaaaaaaagtagaagcggcgattgaaaagcttgaacaa
cgctatttacgaaatgtgacgccgacagaagtggctgaggaacttggcatgagtgaacag
gatgttgtcacaacaatgaatgaaggtttctttgcaaatctgctttcaatcgacgagaag
cttcatgatcaagaagacggtgaaaacgtccaagtcatgattcgcgacgagaaaactgtg
acacctgaagagaagatgctaaaagatgaattaatagaacagcttgctgaaaaaatgacc
gagctatcggaaaaagaaaagctcgtgatcagtctattttataaagaggaactgacgtta
acggaaatcggtcacgtgctcaatttatcgacctcacgcatttcgcaaattcattctaag
gcattgttcaagcttaagcatctgcttgataaagccattcaatcttaa
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integrated database retrieval system
