Bacillus pumilus SAFR-032: BPUM_1569
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Entry
BPUM_1569 CDS
T00599
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bpu
Bacillus pumilus SAFR-032
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpu03016
]
BPUM_1569 (truB)
Enzymes [BR:
bpu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BPUM_1569 (truB)
Transfer RNA biogenesis [BR:
bpu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BPUM_1569 (truB)
Prokaryotic type
BPUM_1569 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ABV62251
UniProt:
A8FDD4
LinkDB
All DBs
Position
1624124..1625053
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AA seq
309 aa
AA seq
DB search
MINGVLLLHKERGMTSHDCVFKVRKILHTKKVGHTGTLDPEVSGVLPICIGRATKIVEYL
TDKSKTYDAEITIGFSTTTEDQTGEIVEEKKVQNPISEEEIDAALKQFQGTIEQIPPMFS
AVKIGGKKLYEYAREGIEIERPSREISIHRIERTTPALFENGTVSFRFTVLCSKGTYVRT
LAVDIGKKLGFPAHMSHLIRTGSGDFTLDECITLDELRDISEEGTVDEHLVPIERALNHL
PKWEINDTLASKVENGAVLPMPDEFAHFAEEDRVAVFAPSGRCMAIYMKHPTKQNLMKPA
KILSQDKQS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgataaatggtgttcttttattacataaagaaagagggatgacctctcacgactgtgtg
ttcaaagtgagaaagatattgcatacaaaaaaagtgggacatacaggtacactcgatccc
gaggtatcaggtgttctgcctatttgtatcgggagagcaacgaagattgtcgaatattta
acagataaatcgaaaacgtatgatgcagaaatcacgattggtttttctacaacaacagaa
gaccaaacaggtgaaatcgtagaagaaaaaaaggtgcaaaaccccatctcagaagaagaa
attgatgctgcgttgaaacagtttcaaggaaccattgaacaaattccacctatgttttcg
gcagtgaaaattggcggaaaaaaactctatgaatatgcaagagaaggcattgaaattgag
cgaccgagccgtgaaatttcgattcaccgtatcgagcggacaacacctgctttatttgaa
aatggaacagtatcatttagatttaccgttttatgttcaaaaggaacgtatgtcagaacc
ttagcggttgatattggaaagaaactaggttttccagctcatatgtcacacctcattcgc
actggttcaggtgattttacactagatgagtgcatcacccttgatgagctgcgagatata
agcgaagaaggcacagtagatgagcaccttgtcccgatcgagcgtgcgctcaatcatttg
ccgaaatgggagataaatgatacattagcaagtaaagtggaaaacggtgcagtcctgcca
atgcctgatgaattcgctcatttcgcagaggaagatcgtgtcgctgtctttgctccttca
ggccggtgtatggcgatatatatgaagcacccgaccaaacagaatttgatgaagccggcg
aagatcttatctcaggacaagcaatcttaa
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