Bacillus pumilus SAFR-032: BPUM_1667
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Entry
BPUM_1667 CDS
T00599
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
bpu
Bacillus pumilus SAFR-032
Pathway
bpu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BPUM_1667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_1667
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BPUM_1667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
DZR
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
ABV62346
UniProt:
A8FDM9
LinkDB
All DBs
Position
1724674..1725522
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AA seq
282 aa
AA seq
DB search
MHTVWKGGISFGLVNIPVKLFTATENKDIKLRQLHKECHTPINYKKVCANCGEEVAPEQI
VKAYEYAKNKFIELDEEELEKLRKENEEKAVEIIDFVKIEEIDPIYYERSYFLSPDTGGA
KAYSLLRKALEESGKIGVAKIMIRSKEQLAIVRCYEHILLMETIHFPDEIRQVSDVPNIP
QEENIVKKELDTALLLIEQLTTTFDPAAYQDEYREQLMNLIGDKISGEHTVQPETTGKKD
PASNVTDLMAALQASIDRSKPAKAKKAAPKKRKTPAKKEKNA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggtttggaaaggcggcattagctttgggctagtcaatattccagtgaagctg
tttaccgctacagagaacaaagatattaaattaagacagctgcataaagagtgtcacacg
cccattaactataaaaaggtttgtgccaactgcggggaagaggtggcaccagaacaaatt
gtaaaagcgtacgagtatgcaaaaaacaaattcattgaattagacgaggaagagcttgaa
aaacttcgaaaagaaaatgaagaaaaagccgttgaaatcattgattttgtgaagatagag
gagattgatccaatctattatgaaagaagttattttttatcaccagataccggcggtgcg
aaagcatattcattattaagaaaagctttagaggaatcggggaaaattggtgtggcaaag
attatgatccgctcaaaggagcaattagcgatcgttaggtgctatgaacatattttgctg
atggaaaccattcattttccagatgaaattagacaagtatcagatgtaccgaatatcccc
caagaagaaaacattgtgaaaaaggagttagatacagcccttcttttaatcgaacagtta
accacaacttttgatccagcagcctatcaggatgaatacagagaacagctgatgaattta
atcggagataaaatatctggagaacataccgttcagccagaaacgacaggtaaaaaagat
ccggcatccaatgtgacggatttaatggcagctcttcaggcttcaatcgatcgatcaaaa
ccagccaaagcgaaaaaggcagcgcctaaaaaaagaaaaacaccagcgaaaaaagaaaag
aatgcataa
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