Bacillus pumilus SAFR-032: BPUM_2162
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Entry
BPUM_2162 CDS
T00599
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bpu
Bacillus pumilus SAFR-032
Pathway
bpu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BPUM_2162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_2162
Enzymes [BR:
bpu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BPUM_2162
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BPUM_2162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
DUF948
Vip3A_N
V-SNARE
Motif
Other DBs
NCBI-ProteinID:
ABV62831
UniProt:
A8FF14
LinkDB
All DBs
Position
complement(2193425..2194771)
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AA seq
448 aa
AA seq
DB search
MSEKAFVTVTALTKYIKRKFDVDPHLEDIWIKGELSNVKIHSRGHVYFTLKDENARMQAV
MFQRSAAKLPFSPKSGMKVFVRGGIQVYEPSGNYQLYAKEMQPDGVGALHLAYEELKKKL
ASEGLFDARYKKPIPEYPEVVGVITSPTGAAVRDVITTINRRYQQAKIIVLPALVQGEHA
TRSIVERIKEANEKQLCDVLIVGRGGGSIEELWAFNEEAVARAIFASDIPIISAVGHETD
FTISDFTADMRAPTPTGAAELAVPSTTDLIERIKSIDIRLTRAVKNQTSQAKDRLLALQS
SYAFRFPKRLQEQKEQQFDLVFDRFQKQLTRQIEQKRSQLDRQTYRLKPLHPKEQLLQAK
KRHANETEQLIRSMNVQMKTIHSQFQSVLGKLNALNPLQVMERGYSLAYKEDELIKSVNQ
VETKDQLTITMKDGRLICEVIEKEGQSS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaagcctttgtgacggtcacagcccttacaaaatacataaaaagaaaattt
gatgttgatccgcatttggaagatatttggatcaaaggtgagttatccaatgtcaagatt
cattcaagagggcatgtgtactttaccttaaaagacgaaaacgcacgcatgcaagctgtc
atgttccagcgctctgcggcgaagctgcctttttcacctaagagtggaatgaaagtattt
gtacgcggcggaattcaagtctatgaaccaagcggcaattatcagttatatgcgaaagaa
atgcagcctgatggtgttggtgctcttcatcttgcttatgaagagctaaagaaaaagcta
gcaagtgaaggcttatttgatgcgcgctataaaaagccaatccctgaatatccagaggtt
gttggtgtcattacgtctccaacaggagcggctgttcgagatgtcattacgaccatcaat
aggcgctatcagcaggcgaaaatcattgtgcttccggcgctcgtccaaggtgagcatgcg
acccgttccatcgtagagcggatcaaggaagcgaatgaaaaacaactctgtgatgtcttg
attgtcggaagaggaggcggttcgattgaagagctttgggcttttaatgaagaagctgtg
gcaagggcgatcttcgcatcagacattccaatcatatctgcagttgggcacgaaacagac
tttacgatcagtgatttcactgcagatatgagagcacccacaccaacaggagcagccgaa
cttgctgttcctagcacgacggatttaatagagcgaatcaaatcaattgatatacggcta
acaagagctgtgaagaatcaaacctcacaagcaaaagaccgccttttggcgctgcagtcc
tcttatgccttccgtttcccaaagcgattacaggagcaaaaagagcagcaattcgatttg
gtatttgaccgttttcaaaaacagctgacaagacaaatagagcaaaaacgcagtcagcta
gaccgccagacatacaggctgaagccacttcatcctaaagagcagctgcttcaagcgaaa
aaacgtcacgccaatgaaacagaacagctcattcgtagtatgaatgtgcaaatgaaaaca
attcattcgcagttccaatcggttcttggtaaactaaatgcattaaatccacttcaagtg
atggaaagaggctacagcttagcctataaagaagatgaattaataaaaagtgtgaaccaa
gtagagacgaaggatcagctgactatcacgatgaaggatggacgtctcatttgtgaggtt
attgagaaggaggggcaatcatcatga
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