Bacillus pumilus SAFR-032: BPUM_2253
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Entry
BPUM_2253 CDS
T00599
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
bpu
Bacillus pumilus SAFR-032
Pathway
bpu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BPUM_2253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpu03021
]
BPUM_2253
Transcription machinery [BR:
bpu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPUM_2253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2316
COR
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ABV62922
UniProt:
A8FFA5
LinkDB
All DBs
Position
complement(2267147..2268268)
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AA seq
373 aa
AA seq
DB search
MADKQAHETETELTFEQVRDKLTETGKKRGVLTYEEIAERMSSFEIESDQMDEYYEYLGE
QGVELISENEETEDPNVQQLAKAEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVNLLSAK
EEITYAQKIEEGDEESKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKF
DYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPT
PEEIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYEL
LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacaagcccacgaaaccgaaactgaattgacctttgaacaggtgagagat
aagctcactgaaacgggtaaaaaacggggcgttttaacatacgaagaaattgcagagcgt
atgtctagctttgaaattgaatcagaccaaatggatgaatactatgaatacttaggcgaa
cagggtgtagagctcattagtgaaaacgaagagacagaagaccctaatgttcagcagctg
gctaaagcggaagaagaatttgacctgaatgatttaagcgtaccaccaggtgtcaaaatt
aatgatcctgttcgtatgtacttaaaagaaatcggacgcgtcaatttgttatctgctaaa
gaagaaattacgtatgcacaaaagatcgaagaaggcgatgaggaatcaaaaagaagatta
gcggaagcaaaccttcgtctcgttgtcagcatcgcgaaacgctacgtcggtcgtggtatg
ctgttcctggacttgattcaagaaggaaacatgggtcttatgaaggcagttgagaagttt
gattaccgcaaaggatacaaattctcaacatatgcgacttggtggattagacaggcgatc
acgcgtgcgattgccgatcaggcaagaacaatcaggatcccggttcatatggtggaaacc
attaataaattgatccgtgttcaaagacagcttctgcaagacctaggcagagaaccaacg
ccagaggaaattgctgaagacatggatttaacgccagaaaaggttagagaaattcttaaa
attgcacaagagccagtatctttagaaacacctattggtgaagaagatgactcgcacctt
ggtgactttattgaagaccaagaggcgacatctccatctgaccatgctgcatacgaattg
ttaaaagagcagcttgaagatgtattagacacgctgacggaccgtgaagaaaatgtactg
agactacgtttcggactagatgacggaagaacacgtacgttagaagaggttggaaaggtg
ttcggcgtcacaagagagcgtatccgccaaattgaagcgaaagctcttcgtaaattaaga
cacccaagcagaagtaaacgattaaaagacttcttagagtag
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