Bacillus pumilus SAFR-032: BPUM_2551
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Entry
BPUM_2551 CDS
T00599
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpu
Bacillus pumilus SAFR-032
Pathway
bpu03030
DNA replication
bpu03410
Base excision repair
bpu03420
Nucleotide excision repair
bpu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPUM_2551
03410 Base excision repair
BPUM_2551
03420 Nucleotide excision repair
BPUM_2551
03440 Homologous recombination
BPUM_2551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpu03032
]
BPUM_2551
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_2551
Enzymes [BR:
bpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPUM_2551
DNA replication proteins [BR:
bpu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BPUM_2551
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BPUM_2551
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPUM_2551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
ABV63211
UniProt:
A8FG44
LinkDB
All DBs
Position
complement(2559806..2562445)
Genome browser
AA seq
879 aa
AA seq
DB search
MTDKKKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAIYGFAMILMKMLEDEKPTHMLVAF
DAGKTTFRHETFKEYKGGRQKTPPELSEQMPFIRELLDAYQVKRYELPQYEADDIIGTLA
VEAEKDGFEVKIFSGDKDLTQLSTDHTTVAITKKGITEVEYYTPAHIEEKYGLRPDQIID
MKGLMGDSSDNIPGVPGVGEKTAIKLLKQFETVENLLEHIDEVSGKKLKEKLEEFKEQAV
MSKELATILVEAPIDVSSKDLAYEGPHMDQVISLYKELGFQTLLERLGEAPETDEQVEVD
ALEVKKMTAVTSEMLTDHAALVVEQLGDNYHEADLIGFAIHNENGAFFMTKEDALQSEAF
KEWVQDETKKKWVFDSKRAVVALRWHDVDLKGVDNDVLLASYVVNPQKTYEDVASVAKEY
GLNIALSDEKVYGKGAKQAIPPEDELKEHLGRKAAAISALHDLTLEALEKNDQHELYEDL
ELPLALILGEMESLGVKVDIKRLENMGEELTKKLKEYEETIHRLAGETFNINSPKQLGVI
LFEKLGLPIIKKTKTGYSTSADVLEKLEDKHEIIRSILHYRQIGKLQSTYVEGLMKVTRK
DTHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSKEGWLMFAADYSQI
ELRVLAHISQDENLIEAFTRDMDIHTKTAMDVFHVSEEEVTSAMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAAAFIERYLTSFKGVKTYMEEIVQEAKQKGYVTTLLKRRRYIPDIT
SRNFNIKSFAERTAMNTPIQGSAADIIKKAMIDMARRLKEEKLQTNLLLQVHDELIFEAP
KEEIAILEKIVPEVMENALQLDVPLKVDFASGPSWYDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaaaaagaaattagtgttagtggatggaaacagccttgcatatcgagccttt
tttgctttgccgctattatcaaatgataaaggcgtacatacaaatgctatttatggcttt
gcgatgatcttaatgaaaatgctggaggacgagaagccaacccatatgctcgtcgcattt
gatgcgggaaaaacaaccttccgccacgagacatttaaagaatataaaggcggaagacaa
aaaaccccgccagagctatcagaacaaatgccattcatccgtgaactattagatgcctat
caggtgaaaaggtacgagcttcctcaatatgaggcagatgatattatcggaacattggct
gtcgaggcagaaaaagacggctttgaagtcaaaatcttctcaggagataaagacttaaca
cagctctcaactgatcatacgacagtggctattacgaaaaaaggcatcacagaagtcgaa
tactacacacctgctcatattgaagagaaatatggtctgcgaccagatcaaatcattgac
atgaaagggctaatgggagattcatcagataatatcccaggcgtcccaggtgtaggcgaa
aaaacagccattaaattgttaaagcagtttgaaacagttgagaacctgcttgaacatatt
gatgaagtgagcgggaaaaaactgaaagaaaagcttgaagaatttaaagagcaagcagtc
atgagtaaagagctggcgaccattctcgtagaagcacctattgatgtgtccagcaaagat
ctcgcctacgaaggtccacatatggatcaagtgatctctctttataaagaactaggcttt
caaacgctgctagagcgtctaggagaagccccagaaacagatgaacaggttgaagtagac
gcattagaagtgaaaaaaatgacagctgtaaccagcgagatgctgacagatcatgcagcc
cttgtggtagaacagcttggagataattatcacgaagcggatttgatcggttttgcgatc
cataatgaaaatggtgcgttttttatgacaaaagaagatgcgcttcaatcagaggcattt
aaagaatgggtacaggatgaaacgaagaaaaaatgggtctttgattcaaaaagagccgtt
gtcgccctcagatggcatgatgttgacctaaaaggtgtcgacaatgatgttctgctcgct
tcctacgtcgtcaacccgcagaaaacttacgaagacgtcgcaagtgtagcgaaggaatat
ggtctgaatatcgctctttctgatgaaaaagtatacggaaaaggagcaaagcaggcgatc
ccacctgaagatgaactgaaagaacatctcggacgcaaagcagcggcgatctcagccttg
catgatttaacactggaagcattagagaaaaatgatcaacatgaactctatgaagattta
gagcttccgcttgcactcatcttaggtgaaatggaatctcttggagtcaaggtagatata
aagcgcctagagaacatgggtgaagaattaacgaaaaagctcaaagaatatgaagaaacc
attcaccgtttagcaggagaaacgtttaatatcaattctcctaaacagcttggcgtcatt
ctttttgaaaaattaggtctcccgattattaagaagacaaaaacaggctattcaacgtct
gcagatgtgcttgaaaagcttgaagataagcatgaaatcattcggtccattctgcactac
agacaaattggaaagctgcaatcgacctatgtagaagggttaatgaaagtaacgcgtaag
gatactcataaagtgcatacaagatttaaccaggcactcacgcaaacaggaagattaagc
tccacagatccaaaccttcaaaacatcccgattcgtttagaagaaggacggaagattcgt
caagcgttcgttccttcaaaagaaggctggctcatgtttgcagcagactattcacaaatc
gaactgcgtgtacttgctcatatttcacaagatgagaatttgattgaagcatttacgagg
gacatggacattcacacgaaaacagcgatggacgtgtttcatgtctcagaagaagaagta
acttccgcgatgagaagacaagccaaggcagtaaactttggtattgtatacggaatcagt
gattacggactttctcaaaaccttggaatcacaagaaaagaagcagccgcatttatcgag
cgctatttaacaagttttaaaggcgtgaaaacctatatggaagaaatcgttcaggaagcg
aaacaaaaaggctacgtcacgacgcttcttaaacgcagacggtatatcccggacatcaca
agccgtaattttaatatcaaaagctttgcagaacgaacagctatgaacacaccgatccaa
ggcagtgcagccgatattattaaaaaagcgatgattgatatggcacgaaggctcaaagaa
gaaaaactgcaaacaaatcttttattacaggtgcacgatgaattgatcttcgaagcgcca
aaagaagaaattgccattcttgaaaagattgttcctgaagtcatggaaaatgcacttcag
cttgatgtgccgctaaaagttgattttgcttcaggtccatcttggtacgacgcgaaataa
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