Bacillus pumilus SAFR-032: BPUM_3148
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Entry
BPUM_3148 CDS
T00599
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bpu
Bacillus pumilus SAFR-032
Pathway
bpu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BPUM_3148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_3148
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPUM_3148
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BPUM_3148
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
TrwB_AAD_bind
AAA
AAA_7
AAA_16
AAA_25
AAA_5
HEM4
AAA_6
UB2H
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ABV63802
UniProt:
A8FHT5
LinkDB
All DBs
Position
complement(3123516..3125501)
Genome browser
AA seq
661 aa
AA seq
DB search
MSDRFELVSNYQPQGDQPKAIEKLVEGIHQGKQHQTLLGATGTGKTFTVSNLIKEVNKPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEID
KLRHSATSSLFERRDVIIIASVSCIYGLGSPEEYRELVLSLRTEMEIERNQLLRKLVDIQ
YSRNDIDFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEILGDREH
VAIFPASHFVTREEKMEKAIVNIEQELEEQLEKLRDNGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPPGSTPYTLLDYFPDDFMIVVDESHVTVPQIRAMYNGDQARKQV
LVDHGFRLPSALDNRPLTFDEFEKHINHIVHVSATPGPYELEKTPEVVEQIIRPTGLLDP
IIEVRPIEGQIDDLIGEIHARIEKNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTIGR
AARNSEGRVIMYADKMTKSMDIAIQETKRRREQQEAYNEKYGITPQTIHKKIRDAIKATK
IHEESEEYETNAAPKLSKMSKKEREKVIEKVELEMKDAAKALDFEKAAELRDLLLELKAE
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaccgctttgaattagtttctaactatcagccccaaggagatcagccgaaggca
attgaaaagcttgtggaggggatccatcaggggaaacagcatcaaacgctgttaggtgct
acaggtacgggaaagacctttactgtatccaatctgattaaagaagtgaacaaaccgaca
cttgtcattgcgcataataagacacttgccggtcagctatacagcgagttcaaggaattt
tttccgaataatgctgtcgaatattttgtaagttactatgattattaccaaccagaggcg
tatgtgcctcagacggatacatttattgaaaaggatgccagcatcaatgatgagattgat
aagctgagacactccgctacgtcctcgttatttgagcggagagatgtcatcatcattgcc
agtgtctcctgtatttatggcttaggttcgccagaggaataccgagagcttgtgctgtct
ttacgtactgaaatggagattgaacgcaatcagcttctacgtaagctggtggacattcag
tattctcgtaatgatatagattttcagcgcggaaccttccgagtacgaggagacgtcgtt
gaaatttttcctgcttcacgtgatgagcattgtatcagagtggagtttttcggtgatgaa
attgaacgtattcgagaagtggatgcactgactggagaaatactcggtgatcgtgaacat
gtggctattttcccagcatctcacttcgtcactagagaagaaaaaatggaaaaagcgatt
gttaatattgaacaagagcttgaggagcagctcgaaaagcttcgagataatggaaaattg
ctagaagcacagcgccttgagcagcggacaagatatgaccttgagatgatgagagaaatg
ggcttttgttcaggaatcgagaattactcaagacatctgaccttgcgtcctcctggttca
accccttatacattgcttgattatttcccagatgattttatgattgttgtcgatgagtcg
catgtgacggtcccgcaaatccgcgcgatgtacaacggggaccaagcaagaaagcaagtg
ttggttgatcacggattccgtctgccttcagcacttgataacagaccgctcacctttgat
gagtttgaaaagcatatcaatcatattgtgcatgtatctgccactccgggtccttatgag
cttgagaaaaccccagaggttgtggaacaaattattcgtccaacaggtttacttgatcca
attattgaagtgcgtccaattgaaggtcaaattgatgacttaattggagaaattcatgcg
cggattgagaaaaatgagcgtgtgctcgtgacgacgctgacgaagaaaatgtctgaggat
ctgacagattatttaaaagagattggaatcaaggtcaattatctgcattcagaaattaag
acccttgagcggattgagattattcgcgatttacgcctcggaaaatatgatgtacttgtg
ggaatcaaccttcttcgtgaaggactggatattccagaggtgtcgcttgtgacgatttta
gatgcagataaagagggcttcttacgctctgaaagatcccttatccagacgattggccgg
gcagcgagaaattcagaaggccgggtcattatgtatgcagataaaatgaccaaatcaatg
gatattgcgattcaagaaacgaagcgaagacgagagcagcaagaggcatataatgaaaaa
tatggaattacaccgcaaaccatccataagaaaattagagatgccattaaagcaacaaag
atacatgaagaatcggaagaatatgaaacaaatgcagcaccaaagctgtcaaaaatgagc
aaaaaagaacgagaaaaagtgatcgaaaaggtcgagttggaaatgaaagatgcagcaaaa
gcgcttgattttgaaaaagcagcagaattaagagatctattgctagagctaaaagcggaa
ggatga
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