Bacillus pumilus MTCC B6033: BW16_05090
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Entry
BW16_05090 CDS
T03175
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bpum
Bacillus pumilus MTCC B6033
Brite
KEGG Orthology (KO) [BR:
bpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpum03019
]
BW16_05090
Messenger RNA biogenesis [BR:
bpum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BW16_05090
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AHL70798
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All DBs
Position
988371..989324
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AA seq
317 aa
AA seq
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MAKGIMTYDVGEQVDLHLLIKSSTKGIASNGKPFLTLILQDQSGDIEAKLWDAKQNDELT
YAAQTIVKVVGDIHHYRGRNQLKLRNIRPVAENEQIRIDDFLETAPIPKHDMMDTIMQYI
FDMKNPNIQRVTRHLLKKYGQEFADYPAATKNHHEFVSGLAYHVVSMLHLAKSIVDLYPS
LDRDLLYSGIILHDLGKVKELSGPVSTTYTVEGNLIGHISIMVTEIAKAAEELGIDSEEI
LILQHLVLSHHGKGEWGSPKPPMVKEAEILHYIDNLDAKMNMMDRALEHVKPGEYTERIF
ALENRSFYKPTFHNESS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagggatcatgacctatgacgtcggcgaacaagttgacctgcatttattaatt
aaatcatctactaaagggattgcgagtaatggcaaaccatttttaacgttaattcttcaa
gatcaaagtggagatattgaggcgaagctatgggatgcaaagcagaatgatgaactcaca
tatgctgcgcaaaccattgtgaaggtagtaggtgatattcatcattatcgcggaaggaat
cagctgaagcttaggaatatacgtcctgttgctgaaaacgagcaaatccgcattgatgat
tttctagaaacagctcctattccaaagcacgatatgatggataccatcatgcaatatatt
tttgatatgaaaaaccctaatattcagcgtgtcacaagacatttgctgaagaaatatgga
caggaattcgctgattacccagcagctacgaaaaaccatcacgagtttgtttcgggtctt
gcctatcacgtggtatcgatgcttcatttagcgaaatccattgttgatctatacccatca
ctagatcgagatcttttatattcagggatcattctacatgatttagggaaagtcaaagag
ctttcgggtcctgtctccaccacatatacagtagaagggaacttaattggccacatttct
attatggtgacagaaattgcgaaagccgcagaggagcttggcattgattctgaggaaatt
ctgattctgcagcatttagtgctgagtcatcatggaaaaggggagtggggcagtcctaaa
ccaccaatggtgaaggaagccgaaattctccactatatagataatttagatgcaaaaatg
aacatgatggatcgtgcgcttgaacatgtgaagccaggagaatatacagagcgtattttt
gcactagagaatcgttcgttttataaaccaacctttcacaatgaatcatcatga
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