Bacillus pumilus MTCC B6033: BW16_08710
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Entry
BW16_08710 CDS
T03175
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bpum
Bacillus pumilus MTCC B6033
Brite
KEGG Orthology (KO) [BR:
bpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpum03016
]
BW16_08710 (truB)
Enzymes [BR:
bpum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BW16_08710 (truB)
Transfer RNA biogenesis [BR:
bpum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BW16_08710 (truB)
Prokaryotic type
BW16_08710 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AHL71460
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All DBs
Position
1653664..1654593
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AA seq
309 aa
AA seq
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MQNGVLLLHKERGMTSHDCVFKVRKILHTKKVGHTGTLDPEVSGVLPICIGRATKIVEYL
TDKSKTYDAEITIGFSTTTEDQTGEVVEEKKVPVPMSEDDIDAALKQFEGTIEQIPPMFS
AVKIGGKKLYEYARQGIEIERPSREITIHRIERTTPVTFENGKVSFRFTVLCSKGTYVRT
LAVDIGKKLGFPAHMSHLIRIGSGDFTLDECITLDELREISEKGTVEEHLVPIERALNHL
PKWEINDTLASKVENGAVLPMPDEFAHFAEEDRVAVFAPSGHCMAIYMKHPTKQNLMKPA
KILSQDKQS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaacggtgttcttttattacataaagaaagaggcatgacctctcacgactgtgtg
tttaaagtgagaaagattttacacacaaaaaaagtgggacatacagggacactcgatcca
gaggtttcaggtgttctgcctatttgtattggacgagcgacaaaaattgtggagtactta
acagataaatcgaaaacgtatgatgcggaaatcaccattggattttctacaacgacagaa
gaccaaacaggtgaagtagtagaagaaaaaaaggtgccggtaccgatgtcagaagatgac
attgatgctgcgttgaaacaatttgaaggaaccattgaacagatccctccgatgttttct
gctgtgaaaattggcggaaaaaagctctatgaatatgcgaggcaaggcattgaaattgaa
cgtccaagccgtgaaattaccattcatcgcatcgagcggacaacacctgtcacatttgaa
aatggtaaagtatcatttagattcaccgtactgtgttcaaaaggcacatatgtgagaacg
ttagctgtcgatatcggaaaaaaacttgggtttccagcccacatgtctcacctcattcgc
ataggatctggtgactttacgttagatgaatgtatcactcttgatgagttgcgggagatc
agcgagaaaggaacggttgaggaacatcttgtgccgatcgagcgtgcgctcaatcatttg
ccgaaatgggagataaatgatacattagcaagtaaagtggaaaacggtgcagtcctacct
atgcctgatgaatttgctcattttgcagaggaagatcgtgtcgctgtctttgctccttca
ggccattgtatggcgatttatatgaagcacccgaccaaacagaacctgatgaagccggcg
aagattttatcacaggacaagcaatcttaa
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