Bacillus pumilus MTCC B6033: BW16_12230
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Entry
BW16_12230 CDS
T03175
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bpum
Bacillus pumilus MTCC B6033
Pathway
bpum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BW16_12230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpum03400
]
BW16_12230
DNA repair and recombination proteins [BR:
bpum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BW16_12230
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BW16_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF4428
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
AHL72119
LinkDB
All DBs
Position
complement(2311243..2312013)
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AA seq
256 aa
AA seq
DB search
MLIKSEGIVLRTTDYGETNKIVTLLTREHGKIGVMARGAKKSNSRLSAISQPFLYGTFLI
QSSTGLGTLQQGEMMESMRTIREDLFLTAYAAYMTELLDKGTEEKKPNPYLFELLLQSLR
HLNEGTDADIILFIVEVKMLSVMGLKPELDQCVHCGQKEGQFHFSIRDNGFICKQCFSKD
PYKLPLSPAAARLLRLFHYFDLSRLGQVDVKPQTKQEIRQVLDHYYEEYSGLYLKSKKFM
NQMESMKKLMDGENKS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgctcattaaaagtgaaggaatcgtccttagaacaacagattatggcgaaacaaacaaa
attgtcacgctgctcactagagaacatgggaaaattggtgtgatggcaagaggcgctaag
aaatcgaacagccgcctgtcagccataagccagccgtttttatacggaaccttcctgatc
caatcatcaacaggacttggaacgctccagcaaggtgaaatgatggaaagcatgcgaacc
attcgggaagatttatttctgaccgcatatgccgcatatatgacagaattacttgataaa
ggaacagaagaaaagaagccaaacccttacttgtttgaacttcttcttcaatctttacgc
catctcaatgaaggcacagatgctgatattattttatttatcgtagaggttaaaatgctg
tcagtgatggggttgaagcctgaactggaccaatgtgtacactgcggtcaaaaagaaggg
cagttccatttctcaattagagataacggattcatctgtaagcaatgcttttctaaagat
ccatataaactgcccttatccccagcagcagcaagactgctccgtttgtttcattatttt
gatttatcaaggcttggtcaggttgacgtgaaaccacagacgaaacaagaaattcgtcaa
gtgctcgatcattattatgaagagtattcaggtctttatttaaaatcaaaaaaattcatg
aatcaaatggaatccatgaaaaagctaatggacggtgaaaacaaaagttga
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