Bacillus pumilus MTCC B6033: BW16_15045
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Entry
BW16_15045 CDS
T03175
Name
(GenBank) positive control sigma-like factor
KO
K24072
positive control factor
Organism
bpum
Bacillus pumilus MTCC B6033
Brite
KEGG Orthology (KO) [BR:
bpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpum03021
]
BW16_15045
Transcription machinery [BR:
bpum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BW16_15045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
UPF0122
Sigma70_ECF
HTH_38
HTH_40
HTH_23
Xre-like-HTH
DUF2774
Terminase_5
HU-CCDC81_euk_2
CorA
DUF7249
Motif
Other DBs
NCBI-ProteinID:
AHL72622
LinkDB
All DBs
Position
complement(2820822..2821340)
Genome browser
AA seq
172 aa
AA seq
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MQDLLIEYKRSLKDARKRYEQLKDKEEKQMSDQDKHDQKMIASMVSDLEYVVEWLQIGRE
PGARRGLDRRSVYQRTILANQEVLEALSHEYTLIQEKEREVSERDKRRIDEALSVLTDRE
KDVFFMHTTQGLSFSEIAIMLDVKKGTVQKHMERARTKMSKKVQERLFRAAE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttactgatcgaatataaaagaagtttaaaagatgccagaaaacgatatgaa
caattgaaagacaaagaagagaaacagatgtcagatcaggacaaacatgatcaaaaaatg
atcgccagtatggtcagtgatttagaatacgtggtggaatggcttcaaatcggtagagag
ccaggcgcacgcagaggattagatagacggtctgtgtaccagcgcaccattcttgctaat
caagaggtattagaggctttatcacatgaatacaccctcattcaagagaaagaaagagag
gtaagtgagcgggacaaaaggcgaattgacgaagccttatccgttttgacagatcgagag
aaagacgtattttttatgcacacaacgcagggtctgtcatttagcgagattgcgatcatg
ctagatgtaaaaaaaggaacagtccaaaaacatatggaaagagctcggaccaaaatgtcc
aaaaaagtacaagaacgcctattcagagctgctgaatag
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integrated database retrieval system
