Blattabacterium punctulatus: DM780_00865
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Entry
DM780_00865 CDS
T07565
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bpun
Blattabacterium punctulatus
Pathway
bpun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DM780_00865 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpun03021
]
DM780_00865 (rpoC)
03400 DNA repair and recombination proteins [BR:
bpun03400
]
DM780_00865 (rpoC)
Enzymes [BR:
bpun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DM780_00865 (rpoC)
Transcription machinery [BR:
bpun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DM780_00865 (rpoC)
DNA repair and recombination proteins [BR:
bpun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DM780_00865 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AWU39549
LinkDB
All DBs
Position
176384..180619
Genome browser
AA seq
1411 aa
AA seq
DB search
MNRKNSRFSKITIRLASPETILKESNGEVLKPETINYRTHKPERDGLFCERIFGPVKDYE
CACGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHISLVVPVVHIWCFRTSPNKIGYLLG
LPSKKLEMIIYYERYVVIQGGIANRLDGSNLKKGDFLTEEEYLYILYKLPKGNQLLDDTD
LNKFIAKMGAECIGDLLNRLDLDLLSIELRNQANNETSKQRRTEALKRLQVVESFREGKK
NGGNISWMIIHVLSVIPPELRPLVPLDGGRYAASDMTDLYRRVLIRNNRLKRLMEIKAPE
VILRNEKRMLQEAVDSLFDNSRKVSAVKTEGNRPLKSLSDSLKGKQGRFRQNLLGKRVDY
SARSVIVVGPHLKLHECGLPKDMAAELYKPFIIRKLIERGIVKTVKSSKKIIDKREPMIW
DILENVLRGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCAAFNADFDGDQMAVH
LPLSPGAILESQLLMLASQNILNPANGSPITVPSQDMVLGLYYMTKPLYLSKNKKFKKKV
FIFYSSEEVKIAYYQNIVKLHTSIKVKVNIRKNDNLLYNQLIETTVGRVLFNQVVPKQVG
FINESLTKKSLREIIGKILHLTNVPTTAKFLDDIKELGFYNAFKGGLSFGLGDIIIPKDK
NNMVDDAIEQVDNVKINYNMGLITNNERYNQVIDIWTNTNAMLTEKVMKHMREDRNGFNP
VYMMLDSGARGSKEQIRQLSGMRGLMAKPQKAGSSGGEIIENPILSNFREGLSILEYFIS
THGARKGLADTALKTADAGYLTRRLVDAAQDVIIKIEDCKTIRGLEISALKKNEEIVDTL
FNRILGRVSLNDVYHPKKNQLLVSSGEMINEKIAYLIEKVGIEFVEVRSPLTCESKMGIC
SQCYGRNLSTGNIVQKGDAVGVIAAQSIGEPGTQLTLRTFHVGGTAGNIAESSQIRAKYD
GIIEFEDLKIVKIKNDYGKKLKIVVSRSTEMKLFNEKKSSILMVHNIPYGATLYVKHGDQ
LKEGDQICKWDLYNAVIVSEYTGIISYQNLEQGISFQVEIDEQTGFQEKVITEVRNKNLI
PTLKIIDNNNKELKFYNLPVGAHLMVEDEEKIEVGKILVKVPRKTAKSGDITGGLPRLSE
LFEARNPSNPAVVSEMDGIVSHGKIKRGNREIIVESKTGDIKKYLVKLSNQILVQDNDYV
KAGMALSDGAITPNDILNIRGPRAVQEYLIREIQEVYRLQGVKINDKHFEIIVLQMMRKI
EVIDIGDTRFLEGNIEYKDDFIEENDRIFQMRVIENSGDSENFKSGDIISYRDFRNENAV
LKYKKKKLIKTRNAIPATGRPILQGITRSALQTKSFISAASFQETTKVLSEAAISSKTDY
LFGLKENVIVGHKIPAGTGLKEYENILSEIL
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaaaaatagtagattcagtaaaattacaattcgattagcttctccagaaact
atattaaaagaatctaatggagaagttttaaaaccggaaacaattaattatagaactcat
aaaccagaaagagatggacttttttgtgaacgtatttttggtccagtaaaagattatgag
tgtgcttgtggtaaatataaaaggatacgttataaaggaattgtttgtgatagatgtgga
gtagaggttactgaaaaaaaagttaggagagaaagaatgggtcatattagtcttgttgtt
cccgttgtacatatttggtgttttagaacttctcctaataaaataggatatttattggga
ttaccatctaaaaaacttgaaatgatcatttattatgaacgatatgtagtaatacaagga
ggtatagctaatcgtttagatggatcaaatttaaaaaaaggtgattttcttacagaagaa
gaatatttatatattttatataaattaccgaaaggtaatcagttattagatgatacggat
cttaataaatttatagctaaaatgggggctgaatgtataggagatcttttaaatcgttta
gatttagatcttttatctattgaattaagaaatcaggctaacaacgaaacatctaaacaa
agaagaactgaagctttaaaacggttacaagtagtggaatcttttagagaggggaaaaaa
aatggaggaaatatttcatggatgattattcatgttttatctgttattccacctgaatta
cgtcctttagtccctctagatggaggtcgttatgcagcttctgatatgaccgatttatat
cgtcgtgtacttataagaaataaccgtttgaaacgactgatggaaattaaagctcctgaa
gttattttaagaaatgaaaaaaggatgcttcaagaagctgtagattctctttttgataat
tcaagaaaggtttctgcagtaaaaactgaaggtaatcgccctttaaaatcattatccgat
tctttaaaagggaaacaaggaagatttagacagaatcttctgggaaaaagagtagattat
tcggcccgttcagttattgtagtaggtcctcatttgaaattacatgaatgtggactacct
aaagatatggcagcagaattatataaaccttttattataagaaaattgattgaaagagga
atagtaaaaactgtaaaatcttccaaaaaaattattgataaaagagaaccaatgatatgg
gatattttggaaaatgtattgcgaggacatcccgtactattaaatagagcaccaacttta
catagattaggtattcaagcatttcagcctaaattaatagaaggtaaagcaatccaatta
catcctttagtttgtgcggcttttaatgcagattttgatggagatcaaatggccgtacat
ttacctttatctccgggagcaattttagaatctcaacttcttatgttagcatctcaaaat
attttgaatccagctaatggatctcccattacggtcccatctcaagatatggtattagga
ttatattatatgactaaaccattatatttatcaaaaaataaaaaatttaaaaaaaaggtt
tttattttttattcttcagaagaggtaaaaatagcctattatcaaaatatagtaaagttg
catacttcgattaaggtaaaagtgaatattcgaaaaaatgataatttattatataatcaa
ttaatagaaactactgtaggtagagttttatttaatcaagttgttcctaaacaagtagga
tttattaatgaatcccttacaaaaaaatctttaagagagattattggaaaaattttacat
cttactaatgtacctactactgcaaaatttttagatgatattaaagaattaggtttttat
aatgcatttaaaggtggtctatcttttggattaggggatattattattccaaaagataaa
aataatatggtagatgatgctatagaacaagttgataatgtaaaaataaattataatatg
gggttaattacaaataacgaacgttataatcaagttattgatatttggactaatacaaat
gcaatgcttacagaaaaagtaatgaaacatatgcgtgaggatagaaatggttttaatcca
gtttatatgatgttagattctggtgctagaggttctaaagaacaaattcgtcaactttct
ggtatgcgaggattaatggcaaaaccccaaaaagctggatcttctggtggagaaattatt
gaaaatccaattttatcaaattttagagaaggtctatctattttagaatattttatatca
actcatggagctcgtaaaggattagcagatactgctttaaaaacggcagatgctgggtat
cttactcgacgtttagttgatgctgcgcaggatgttattataaaaatagaagattgtaaa
actatacgtggtttagaaatatctgctttaaaaaaaaatgaagaaatagtggatacatta
tttaatagaattttaggaagagtatctttaaatgatgtttatcatcctaaaaaaaatcaa
ttattagtttcttctggagaaatgataaatgaaaaaattgcgtatttaattgaaaaagtt
gggattgaatttgtagaagttcgttctcctcttacttgtgaatctaaaatggggatttgt
tctcaatgttatggtagaaatttatctactggaaatatagttcaaaaaggagatgctgta
ggagttattgcagctcaatctattggagagccaggtacacaattaactcttagaactttt
catgttggaggtacagctggaaatatagctgaatcttctcaaataagagcaaaatatgat
gggattatagaatttgaagatttaaaaattgtaaaaataaaaaatgattacggaaaaaaa
ttaaaaatagttgtttctcgttctacagaaatgaaactttttaatgaaaaaaaatcttct
attttaatggttcataatattccttatggagcaactttatatgttaaacatggtgatcaa
ttaaaagaaggagatcaaatctgtaaatgggatttatataatgcagttattgtttcagaa
tatactggaataatatcttatcagaatttagaacaaggtatatcttttcaagtagaaatt
gatgaacaaactggatttcaggaaaaagttattacagaagtaagaaataaaaatttaata
ccaacattaaaaattattgataataacaataaagaattgaaattttataacctaccggta
ggtgctcatttaatggtagaagatgaagaaaaaatagaagtaggtaaaattttagttaaa
gttcctagaaaaactgctaaatctggtgatattacaggaggattacctcgattatcagaa
ttatttgaggcacgtaatccatctaatccagcagtagtatcagaaatggatggaatagtg
agtcatggaaaaataaaaagaggaaatagagaaattattgttgaatctaaaacaggtgat
ataaaaaaataccttgtaaaactttctaatcaaattcttgttcaagataatgattatgtt
aaagcgggtatggctttatctgatggtgctataacacctaatgatattttaaatataaga
ggacctagagcagttcaagaatatttaattagagaaatacaggaagtatatcgattacaa
ggtgtaaaaattaatgataaacattttgaaattattgttttacaaatgatgcgaaaaata
gaagttatagatataggagatactagatttttagaaggaaatattgagtataaagatgat
tttatagaagaaaatgatagaatttttcaaatgagagttattgaaaattcgggggattcc
gaaaattttaaatctggagatataattagttatagagattttagaaatgaaaatgcagtt
ttaaaatataaaaaaaagaaattgataaaaactagaaatgctattcctgctactggaaga
cctatattacaaggaattacaagatctgcattacaaactaaatcttttatatctgcagca
tcttttcaggaaactactaaggtattaagtgaagcggctataagtagtaaaacagattat
ttatttggattaaaagaaaatgttattgtagggcataaaatacctgcaggaactggatta
aaagaatatgaaaatattttatcagaaattttataa
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