Borrelia puertoricensis: bpuSUM_000340
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Entry
bpuSUM_000340 CDS
T08229
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpur
Borrelia puertoricensis
Pathway
bpur03420
Nucleotide excision repair
bpur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
bpuSUM_000340
03430 Mismatch repair
bpuSUM_000340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpur03400
]
bpuSUM_000340
Enzymes [BR:
bpur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bpuSUM_000340
DNA repair and recombination proteins [BR:
bpur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
bpuSUM_000340
MMR (mismatch excision repair)
Other MMR factors
bpuSUM_000340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_11
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
UPA17840
LinkDB
All DBs
Position
complement(353719..355812)
Genome browser
AA seq
697 aa
AA seq
DB search
MNKIEKFFFSLNSYQKQIVLDDNKNPILVLAGPGSGKTRVITAKIAHLIKEMQLKPEEIL
ALTFTNKAANEMNLRLNYLFDFNKALHIQTFHSFGAWLLRLYFKEFDKNYDSNFTIWDTN
DVVKFVKQIGLASTIELSKHVASFILKCKENYFLDNYCDLDEKSYKDIKFYEQEKSKSNA
FDFVDLILKAVLMLRDCEDVKMRVQKKFKAIFVDEYQDTNYTQFLFLKKLYCKNMHFMVV
GDEDQSIYSFRGARIENILEFEKVFDNVSKYYLVQNYRSSLSIVNVANDVISKNRNRYEK
VISTENKIGKKIRFFVFRNPAEEAEYFSNFLIENELETAVLYRFNYQSLQFEKSFLKHNI
PHKILGSIRFYEREEIKDVISLLRLFVNRKDKISFLRVINKPARGIGKITTNKIIAMLND
RNVNFDLILASRKFAESLKGKAKDSLIAFLNLYDKLAESIQKGVYVNLSEFIKNVVIRSG
FWDYYQKFDEDEKSRNIDELISSGVEYSGSFEGLVIFLENSSLSPLIHGDSKSSVLLSSI
HGVKGLEFDRVIISGLEKGLLPSEIEELTGERLEEERRLFYVAITRAKFELIVTINLQRF
FGGMLRNTAISVFFQDIRKDNYDIVFVPEYLKDNFKYFFSKSGNKSFNIGDYITYNGENG
IVVDKWYQNGEPFIKINLRNGRKAILSSSYIKGLAKI
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaatagaaaaattcttctttagtttaaattcttatcagaaacaaattgtttta
gatgataataaaaatcccattcttgttttggcaggtccaggcagtggtaaaacaagggtt
ataacagctaaaatagcacacttaataaaggaaatgcaattaaaaccagaagaaattctt
gctttgacatttacaaataaagccgcaaatgagatgaatttaagactaaattatcttttt
gattttaataaggctttacatatccagacttttcattcttttggtgcttggcttttgaga
ctttattttaaagaatttgataagaattatgattcaaattttacaatttgggatactaat
gatgttgttaaatttgttaagcaaattgggcttgcttcaaccattgagctttcaaagcat
gttgcgtcttttatacttaaatgtaaggaaaattactttttagataattattgtgatctt
gatgagaaaagttacaaggatattaaattttatgagcaagaaaaatctaaaagtaatgct
tttgattttgttgatcttattcttaaagccgttttgatgttaagagattgtgaagatgta
aagatgagggttcagaaaaagtttaaggctatttttgtagatgagtatcaagataccaat
tatacacagtttttgtttttaaaaaagctttattgtaaaaatatgcattttatggtagta
ggagatgaagatcagtctatttattcttttagaggtgctagaattgaaaatattcttgaa
tttgaaaaagtatttgacaatgtgtctaaatattatttggtacaaaattatcgttctagt
ttaagcattgttaatgttgcaaatgatgttatttcaaagaatagaaatcgatatgaaaaa
gtaataagtacagaaaacaaaataggcaagaagataagattttttgtttttcgaaatcct
gcagaggaggctgaatatttttctaatttccttattgaaaatgaacttgagacagctgtt
ctttatagatttaattaccaatctttgcagtttgagaaatcttttttaaaacataatatt
ccacataaaatattaggttcaattagattttatgaaagagaggagattaaagatgtaatt
tctttgttaagactttttgtaaatagaaaagataaaatttctttcttaagagtaataaat
aagcctgctagggggattggaaaaattactacgaataaaataattgcaatgcttaatgat
cgtaatgttaattttgatttaattcttgcaagtagaaaatttgctgagagtcttaagggc
aaagcaaaagattctcttattgcttttttaaatctgtatgataaactagcagaaagtata
caaaaaggtgtttatgtaaatttatctgaatttattaaaaatgttgtaattagatctgga
ttttgggattattatcaaaaatttgatgaggatgaaaagtctagaaatattgatgaactt
atcagtagtggagttgaatattcaggcagttttgagggacttgtaatatttttggaaaat
tcatctctttcacctttaatacatggggattctaagtctagtgtactgctctcttcaatt
catggagttaaaggacttgaatttgatagagtaataatatctggtcttgaaaagggttta
ttgccttctgaaattgaagaattgactggagagagactggaagaagagagaagacttttt
tatgttgctattactagagccaaatttgagcttattgttacaattaatttacaaagattt
tttggaggcatgcttagaaatacagctatatcagtctttttccaagatattagaaaagat
aattatgatattgtttttgttccagaatatttaaaagataattttaaatattttttttca
aaaagtggtaataaaagctttaatattggagattatataacttataatggtgagaatgga
atagttgttgataagtggtatcaaaatggtgagccatttattaaaattaatctaagaaat
gggagaaaagctattttgagttcaagttatattaaaggacttgctaaaatttag
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