Borrelia puertoricensis: bpuSUM_000504
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Entry
bpuSUM_000504 CDS
T08229
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bpur
Borrelia puertoricensis
Pathway
bpur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
bpuSUM_000504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpur03021
]
bpuSUM_000504
03400 DNA repair and recombination proteins [BR:
bpur03400
]
bpuSUM_000504
Enzymes [BR:
bpur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
bpuSUM_000504
Transcription machinery [BR:
bpur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
bpuSUM_000504
DNA repair and recombination proteins [BR:
bpur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
bpuSUM_000504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
CT0912-like_C
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UPA17985
LinkDB
All DBs
Position
511884..512915
Genome browser
AA seq
343 aa
AA seq
DB search
MSLGKLLKDFTIPDRIEFLRGEDDSSYGKFIMYPFEKGFGVTIGNTLRRVLLSSIEGYAI
SAMRVQSNQGGSLKIVSSEFDLIPGVVEDTLEVIANIKNIHLKLDEGVNTTTINLSVNGK
DTNVLKAVHLEREGVEVFNKDLVIATLSSEANLDFEFQINYGRGYVSSEQNAKYLEEVNT
IALDSIFSPIEKVTYSVEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASVVRDFLLP
LVNFEDKVVHSVKSSELRDSDILSINIEKLNLSVRSLNCLTKENVKTLGELISKSAEDLS
KARNFGKKSLEEIIEKLSAYGLFLGMSKAEALKILNKNDKISH
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaggaaagcttttgaaagattttactatacctgataggattgagtttttaaga
ggagaggatgatagttcttatggaaaatttataatgtatccttttgagaaaggttttggt
gttactattggtaacactttaaggcgagttttgctatcttctattgaaggatatgctatt
tctgctatgagggttcagtctaatcaaggtgggtctttaaagatcgtttcaagtgaattt
gatttaatacctggtgttgtagaggatactcttgaagtaattgctaatattaaaaatatt
cacttaaagttagatgagggagttaatactactacaataaatctttctgttaatggaaaa
gatactaatgttttaaaggcagttcatcttgaaagagaaggtgttgaagtttttaataaa
gatttagttattgctacactttcaagtgaggcaaatttggattttgaatttcaaatcaat
tatggaagaggttatgtttcttctgaacagaatgctaaatatttagaagaagttaatacc
attgcacttgattctatattctctccaatagaaaaggtgacatattctgttgaagatact
agagttgggcagagatctgattatgataaacttgttatggaaatttggacaacaggtgta
attagtgctaaagacgcaattaaaaaagcggcttctgtagtgagggactttttgcttcca
ttggttaattttgaagataaggttgtacattctgttaagagttctgaacttagagattcc
gatatacttagtataaatattgagaaattaaatttatctgttagatctcttaattgttta
accaaggaaaatgttaagactttaggagaacttattagcaaaagtgcagaggatctttca
aaggcaaggaactttgggaaaaaaagtttagaagaaataattgaaaagcttagtgcttat
ggattatttttgggaatgtctaaggcagaagctctaaaaatattgaataaaaacgataaa
atatctcattag
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