Borrelia puertoricensis: bpuSUM_000639
Help
Entry
bpuSUM_000639 CDS
T08229
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bpur
Borrelia puertoricensis
Pathway
bpur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
bpuSUM_000639 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpur03400
]
bpuSUM_000639 (recD)
Enzymes [BR:
bpur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
bpuSUM_000639 (recD)
DNA repair and recombination proteins [BR:
bpur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
bpuSUM_000639 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
AAA_11
UvrD_C_2
PIF1
Helicase_RecD
SLFN-g3_helicase
AAA_22
RsgA_GTPase
DEAD
PhoH
NPHP3_N
T2SSE
AAA_5
Zeta_toxin
AAA_16
AAA
TsaE
RNA_helicase
AAA_28
Death_TNFRSF11B
DUF3825
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UPA18099
LinkDB
All DBs
Position
complement(668534..670360)
Genome browser
AA seq
608 aa
AA seq
DB search
MRNFLVLREFLKDHKRNYLNPELKIYEIIETLNINIENYYKAHLLTKKIKDEKYEEITTF
LIFLFNYLSKGHLRANINLLIKDIQNTINCAFLEIEDEDQSYQKSINILEELEKFTQATK
IYKIILHLKENNIMKDLNKNERIITPLILENNINIYTQKNFREEEELIKKIDQRLKDNKS
EITTQRIQNIMNNLNTKDLSEEQINAIKKSLKSNFFILSGGPGTGKTTTINYILKAIDMH
SNVKQKVALVAPTGKASQKLKSSLKESFKNLETEYSTVQKLLKMSFINKGNKYDEANPLE
FEIIIIDEASMIDSSTFLKLLKAVKISTKLIITGDKNQLPSIAGGNVYSSLTQIKEINDE
NIEILKKNFRSNDGINLLAKAIYQEDTNLIDIQLNANKNIILKDINKVNIENELLNHIKN
LYKKIYNFDLNSLNNKEIKLIINALLSNVILCSRNFGKFGTKRINEIIKLYLKKIYGNLI
GQIILITQNDYKNDLFNGERGILFRENSKIYALFKKEDEKYKRINFNLINKYELSFATTI
HKSQGSEYQHVQIIIEDNPFLTKELLYTAITRAKESIKIISSKDIIKNVSLKTIKRDSKI
SDHIDALK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattttttagtcttaagagagtttttaaaagatcataagagaaactatttgaat
ccagaactcaaaatttatgaaataatagaaactttaaacataaacatagaaaattactat
aaagcacatttactcacaaaaaaaatcaaagatgaaaaatacgaagaaattactactttt
ttaatattcttatttaattatctctctaaaggacacttaagagctaatattaatttatta
attaaagatattcaaaatacaatcaactgtgctttccttgaaatagaagatgaagatcaa
tcttatcaaaaatcaatcaacatactagaagaacttgaaaagtttacacaagcaacaaaa
atatacaaaataatcttacatttaaaagaaaataatataatgaaagatcttaataaaaat
gaaagaatcataactcctttaatattagaaaataatattaatatctatacccaaaaaaac
tttagagaagaagaagaattaataaaaaaaatagatcaaagacttaaggataataaaagt
gaaataactactcaaagaatacaaaatatcatgaacaacttaaacactaaggacctaagt
gaagaacaaatcaatgcaatcaaaaaatctttaaaaagtaatttctttatactcagtggc
ggaccgggaacaggcaaaacaacaactataaattatattctaaaagcaattgatatgcac
tcaaatgttaaacaaaaggtagcccttgtagcaccaactggaaaagcaagtcaaaaacta
aaatcaagtctaaaagaatcatttaaaaatcttgaaacagaatatagcacagtacaaaaa
ttattaaaaatgtcatttatcaataaaggcaataaatatgatgaagccaaccccctagaa
tttgaaataataataattgatgaagcatctatgatagattcaagcactttcttaaaattg
ctaaaggcggttaagataagcacaaaactcataataacgggggacaaaaaccaacttcca
tcaatagctggaggcaatgtatattcaagtctaacgcaaataaaagaaataaatgatgaa
aacatagaaatacttaaaaaaaattttagaagtaacgatgggataaatttattagccaaa
gcaatatatcaagaggacacaaatctaattgatattcaacttaatgccaacaaaaatata
attttaaaggacataaataaagtcaatattgaaaatgaattattaaatcacataaaaaac
ttatataaaaaaatctataattttgatctcaattcactaaataacaaagaaattaaatta
ataattaatgctttgcttagcaacgtcattttatgctcaagaaattttggaaaatttgga
acaaaaagaataaatgaaataataaaattatatttgaaaaaaatctatggcaatttaatt
ggacaaataattttaattactcaaaatgattataaaaacgatctatttaatggagaaagg
ggtattctctttagagaaaactctaaaatttacgctttattcaaaaaagaagatgaaaaa
tacaaaagaatcaactttaatttaataaacaaatatgaacttagttttgcaacaaccata
cataaaagccaaggctctgaatatcaacatgtacaaataataatagaagataatccattc
ttaacaaaagaactactctacactgcaataacaagagctaaagaaagcataaaaataata
tcaagcaaagacattattaaaaatgtcagcctaaaaacaataaaaagagattcaaaaatc
tcagatcatatagatgcattaaaataa
DBGET
integrated database retrieval system
