Bacillus pumilus SH-B9: UP12_00585
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Entry
UP12_00585 CDS
T04776
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bpus
Bacillus pumilus SH-B9
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpus03400
]
UP12_00585
DNA repair and recombination proteins [BR:
bpus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UP12_00585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
SLFN-g3_helicase
AAA_22
nSTAND3
AAA_16
GvpD_P-loop
AAA_24
ATPase_2
AAA_5
AAA_30
NTPase_1
NPHP3_N
AAA_14
AAA
RecA
ABC_tran
KTI12
Elong_Iki1
AAA_19
KdpD
divDNAB
ATP-synt_ab
NACHT
Isochorismatase
DAP3
DUF7129
ArsA_ATPase
MCM
Zeta_toxin
DZR
AAA_31
HypA
Motif
Other DBs
NCBI-ProteinID:
AMM95941
LinkDB
All DBs
Position
109202..110581
Genome browser
AA seq
459 aa
AA seq
DB search
MAKTKSKFICQSCGYESAKWMGKCPGCGTWNSMTEEVVRKEPVNRRSAFNHSVQTIQKPS
PISAIETSDEPRIKTNLEEFNRVLGSGIVKGSLVLIGGDPGIGKSTLLLQVSAQLSDKNQ
NVLYISGEESIKQTKLRADRLGIKSTSLHVLAETDMEYITSAIQEMKPAFVVVDSIQTVY
QSDITSAPGSVSQVRECTAQLMKIAKTNGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYF
EGERHHTFRILRAVKNRFGSTNELGIFEMREEGLTEVLNPSEIFLEERSAGVSGSCVVAS
MEGTRPVLVEIQALISPTSFGNPRRMATGLDHNRVSLLMAVLEKRVGLLLQNQDAYLKVA
GGVKLDEPAIDLAIAVSIASSFKDAAPHQADCFIGEVGLTGEVRRVSRIEQRVQEAAKLG
FKRMFIPQANIDGWKKPRGIELVGVENVAEALRISLGGS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctaagacaaaatcaaaatttatatgccaatcgtgcggttatgaatcagccaaatgg
atggggaaatgtccaggctgcggcacgtggaacagtatgacagaagaggtcgttcgtaaa
gagccggtaaaccgtcgaagcgcttttaatcattctgtccaaaccattcaaaaaccttca
cctatttctgcaattgaaacatcagatgaaccccgaatcaaaacgaatttagaagaattt
aaccgagtattaggaagtggaattgtcaaaggctctcttgttctcattggcggagatcct
ggaattgggaagtccacattattattacaagtatcagcacagctctcagacaaaaatcag
aatgtattatacatatccggtgaggagtccattaaacaaacgaagttaagagcggaccgc
ctcggcataaaaagcacctctttacatgttttggctgaaaccgatatggagtatataacg
tctgctatacaagagatgaaacccgcttttgtcgtggtggattcgattcaaactgtttat
caaagcgatattacgtcagctcctgggtctgtatctcaagtgagagaatgtacagcgcag
ctgatgaagattgccaagacaaatgggattccaatttttattgttggtcacgtgaccaaa
gaaggctcgatcgcaggtccacgtcttttagagcatatggtggacacggttctttatttt
gaaggtgagcgtcatcatacgtttcgtatcttacgtgcagtgaaaaaccgatttggttca
acgaatgaactagggatttttgaaatgagagaggaagggctcacggaagtattaaaccca
tccgaaattttcttagaagaacgttcggcaggtgtatctggttcgtgtgttgttgcctca
atggaaggaacaagacctgttcttgtcgagatacaagcgctaatttcaccaacaagcttc
ggaaatccgcgtagaatggccactggtcttgatcataatcgagtgtcactgctcatggcg
gttttagaaaaacgtgttggactgctgctgcaaaaccaggatgcgtatttaaaggtcgca
ggcggtgtgaagcttgacgaaccagcaattgacttggccattgcggtcagtattgcctcc
agctttaaagacgcagcgccgcatcaagcggattgctttataggagaggtcggtctgacg
ggagaagtcagaagagtatcaagaattgaacagcgtgtgcaggaagcggcgaaactagga
tttaagcgaatgtttattcctcaggcgaatatagatggatggaaaaagccgagagggatt
gagttagtcggtgtagaaaatgtagcggaggcacttcgaatttcactagggggatcatag
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