Bacillus pumilus SH-B9: UP12_00865
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Entry
UP12_00865 CDS
T04776
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bpus
Bacillus pumilus SH-B9
Pathway
bpus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UP12_00865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpus03021
]
UP12_00865
03400 DNA repair and recombination proteins [BR:
bpus03400
]
UP12_00865
Enzymes [BR:
bpus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UP12_00865
Transcription machinery [BR:
bpus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UP12_00865
DNA repair and recombination proteins [BR:
bpus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UP12_00865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PASTA
Motif
Other DBs
NCBI-ProteinID:
AMM95994
UniProt:
W8QVU2
LinkDB
All DBs
Position
152123..153067
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTTIILNIKKLALKIYSEEEKTLEIDVQDEGTVTAADITHDSDIEI
LNPDLHIATLGKNASFRVRLTAQRGRGYNPADANKRDDQPIGVIPIDSIYTPVSRVTYQV
ENTRVGQITNYDKLTLDVWTDGSTGPKEAIALGSKILTEHLNIFVGLTDEAQHAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccaaaaatcgaaacggttgaaatcagcgacgatgccaagtat
ggcaagtttgtcgtagagccacttgagcgtggatatggtaccactttagggaactccctt
cgtcgtatccttttatcctcacttcctggtgcagctgtaacatcgatccagatagatggt
gtcttacacgaattctcaacgatcgaaggcgtggttgaagatgttacaacgattatctta
aacattaaaaagcttgcactcaaaatctactctgaagaagagaagacgcttgaaattgat
gtacaagatgaaggtactgtaacagctgctgatattacacacgacagcgatattgaaatc
ttaaatccagatctccacatcgcaactcttggcaagaatgcgagcttccgtgttcgctta
actgcacaaagaggtcgcgggtataatcctgctgatgcaaacaaaagagacgatcagcca
atcggtgtgattccgatcgactcaatctatacacctgtatctcgtgtgacttatcaagtg
gagaacacccgtgttgggcaaatcacaaactatgataaattaacactagatgtatggact
gatggaagcacaggaccgaaagaagcgatcgctctaggttctaagattttaactgaacac
ctgaatattttcgttgggttaactgacgaagctcagcatgctgaaattatggttgagaaa
gaagaagaccaaaaagaaaaagtgcttgaaatgacaattgaagagcttgatctttctgtt
cgttcttacaactgtttgaagcgtgcgggtattaatactgttcaagagcttgctaacaag
acagaagaggatatgatgaaagttcgtaaccttggacgtaaatctcttgaagaagtgaaa
gcgaaactagaagaacttggactgggtcttcgtaaagacgattga
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