Bacillus pumilus SH-B9: UP12_02580
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Entry
UP12_02580 CDS
T04776
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
bpus
Bacillus pumilus SH-B9
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpus03021
]
UP12_02580
Transcription machinery [BR:
bpus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UP12_02580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
DUF134
HNF-1_N
HTH_3
GerE
DUF1492
HTH_23
IF2_N
TnsD
NirdL-like_HTH
Phage_rep_O
KORA
HTH_28
Sigma70_ECF
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AMM96305
LinkDB
All DBs
Position
536647..537435
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AA seq
262 aa
AA seq
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MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDVLAKKYSKGKSFHEDLR
QVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKTWSVHVPRRIKELGPRIKM
AVDHLTTETQKSPKVQEIAEYLDVTEEEVLETMEMGKSYQALSVDQGVEADSEGSTVTIL
DVVGSQEEGYERVNQKMMLESVLHVLTDREKEIINLTYLQNKSQKETGDLLGISQMHVSR
LQRKAVKKLRDALSEDASMELG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaccatccaaaactatgaaactaactaaagatgaagtggatcgccttatccaa
agctatcaatccaatcaagatgagcaggcgcagctcacgctggtcgaatgctatacaaac
ttggttgatgtgctggcaaaaaaatattcaaaaggaaaaagctttcatgaggacctcaga
caagttggaatgattggtttacttggcgccattaagcgatacgatccactagtcggtaaa
tcatttgaagcctttgctattccaaccattatcggggaaatcaaacgctttttacgggat
aaaacgtggagtgtccatgtaccaaggcgaatcaaagagcttggaccaagaatcaagatg
gccgttgatcatctaacaacagagacgcaaaagtcacctaaagtccaagaaattgcagaa
tacctagatgtgacagaggaagaagtactggaaaccatggagatgggcaaaagctatcaa
gcactgtctgtcgaccaaggcgtagaggcggattctgaaggaagtacagtcaccatttta
gacgttgtcggctcacaagaagagggctacgaacgtgtcaaccaaaaaatgatgcttgag
agtgtgcttcatgttctgacagatcgagaaaaagagattatcaatctgacttatttgcaa
aataagagtcaaaaagaaacaggcgatttactcgggatatcccaaatgcatgtatcaaga
ctgcaacggaaggcagttaagaagctacgagatgcattatcagaagatgcgtctatggag
ctagggtaa
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