Bacillus pumilus SH-B9: UP12_04080
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Entry
UP12_04080 CDS
T04776
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bpus
Bacillus pumilus SH-B9
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpus03009
]
UP12_04080
Enzymes [BR:
bpus01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
UP12_04080
Ribosome biogenesis [BR:
bpus03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
UP12_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Cons_hypoth95
MTS
Methyltransf_15
Ubie_methyltran
Methyltransf_11
PrmA
Methyltransf_32
TehB
UPF0020
PabTrmU54_TRAM_dom
NADH-G_4Fe-4S_3
Motif
Other DBs
NCBI-ProteinID:
AMM96562
LinkDB
All DBs
Position
863461..864846
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AA seq
461 aa
AA seq
DB search
MKEKQQSALLQKGQQFPLTIKRLGINGEGVGYFKKQVVFVPGALPGEEVVVEATNVQAKY
AEGTVRKVRKRSEHRVKPPCPVYEECGGCQLQHLAYEQQLREKRDIVIQSMERHTKLPVE
QLDIRPTIGMEDPWHYRNKSQFQVGRSHSGDIIAGLYGLNSHKLVPIKECIVQHPKTNKT
TGVVRKILEKFGVSVYNERTRKGDVRSIVVRVGFETGEVQVVLVTSKPEFPKKREIAEAI
QKRLPEVTSIMHNINGEKTSVIFGYKTSHLAGNMVIQEFLGDVSFELSARAFFQLNPKQT
LKLYDEAKKAAKLTGKEKVVDAYCGVGTIGMWLSDGAKEVRGMDVIKESIDDAKKNAKKH
GMKNATYVTGTAEHWLPKWVKEGFRPDVIVVDPPRTGCERTFLDSVKQVQPKRLVYVSCN
PSTLAKDLEYMSKDYKIEYMQPVDMFPHTSHVETVVSLVKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaaaaacagcaaagtgcccttttgcaaaagggacagcagtttccgcttaccatt
aaacgccttggcattaatggggaaggggtcgggtattttaaaaagcaagtggtctttgtc
ccaggtgcgcttccaggcgaagaagtggttgtggaagcaacgaatgtccaagcaaaatat
gcagaaggtacggttagaaaagtaagaaagcgttccgagcatcgagtgaaaccgccatgc
ccagtatacgaagagtgcggaggctgtcagcttcagcatttggcgtatgagcagcagcta
agggaaaaacgagatattgtcattcaatcaatggaacgacatacaaaactaccagttgaa
cagcttgatatcaggccgacgatcggtatggaagatccatggcactaccgaaataaaagt
cagtttcaagtagggcgttctcatagcggtgacatcattgcagggctttacggactgaac
tctcataagcttgtaccgatcaaggaatgcatcgtgcagcatccaaaaacgaacaaaaca
acgggcgttgtccgcaaaattttagagaaattcggtgtatcggtctacaatgaacggacg
agaaaaggcgatgtacgctcaattgttgtgcgtgtcggttttgaaacaggtgaagtacag
gtcgttctagtcacatcaaaacctgaatttccaaagaaaagagaaattgccgaagccatt
caaaaacgtttgccagaagtgacgtccattatgcacaacatcaatggtgaaaaaacgtcg
gtcatctttggctataagacatctcacctagctggcaacatggtcattcaagaattttta
ggagacgtctccttcgaactgagtgcacgtgctttcttccaattgaatccgaagcaaacg
ctaaagctttacgacgaagcgaaaaaagcggcaaagctgactggcaaagaaaaagttgtc
gatgcgtattgcggcgttgggacgattgggatgtggctttcagatggcgccaaagaagta
cgaggaatggatgtcatcaaagaatcgattgatgatgccaagaaaaatgctaaaaaacac
ggcatgaaaaacgcgacctatgtgacaggaacagctgaacattggctgccaaaatgggtc
aaagaaggcttccgtcctgacgtcatcgtcgtggacccgccaagaacaggctgtgagcgc
accttcttagactccgtcaaacaagtccaaccaaaacgtcttgtctacgtctcttgcaac
ccatcaacactagcaaaagacctcgaatacatgtcaaaagactacaaaatcgaatacatg
cagccagtcgatatgttcccgcatactagtcatgtggagactgttgtatctctcgtgaaa
aaatag
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