Bacillus pumilus SH-B9: UP12_04125
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Entry
UP12_04125 CDS
T04776
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
bpus
Bacillus pumilus SH-B9
Pathway
bpus00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
UP12_04125
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bpus01007
]
UP12_04125
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpus03016
]
UP12_04125
Enzymes [BR:
bpus01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
UP12_04125
Amino acid related enzymes [BR:
bpus01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
UP12_04125
Transfer RNA biogenesis [BR:
bpus03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
UP12_04125
Prokaryotic type
UP12_04125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
PADRE
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AMM99396
LinkDB
All DBs
Position
873699..875630
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AA seq
643 aa
AA seq
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MREKMVKIQFPDGKIKEFSAGTTVADVASYISPSLRKKAVAGKINEQMVDVSHQLDCDAR
LSIVTLDSKEGLEVLRHTSAHVLAQAVKRLYDNVTLGIGPVIENGFYYDMKLNQTLSIED
LAAIEKEMENIINENHHIQRKEISYEEAESLFAHDPYKLDILKHLPSEEAITVYQQGEFI
DLCRGPHLPSTGFVKSFKLTRVAGAYWRGDSHQDVLQRVYGVAFQHPKQLAEYLHFMEEA
NKRDHRKLGKQLSLFMFSEEAPGMPFYLPKGQLVRNELMAFSREVRSKAQYEEVSTPFMM
NQELWEKSGHWDHYHENMYFSEVDHTSFALKPMNCPGHMLMFKNSLFSYRDLPIRMAEFG
QVHRHEFSGALNGLFRVRTFCQDDAHIFLREDQIEAEIKRIFQLVDHVYRTFGFEYSVEL
STRPEKALGDDAIWDISESALKNVLDRLKVDYQLNEGDGAFYGPKIDFHIKDALQRSHQC
ATIQLDFQMPEKFDLTYINEKNEKVRPVVIHSAIFGSLDRFLGILIEHFAGAFPLWLAPV
QVQIIPVSKVHLDHCLEVQQQLRKIGIRVTIDERDEKLGYKMREAQMQKIPYIAVIGDTE
MQEKTLNIRQHGEKTSRQLSIDDFKHMAAQQIKDRTAAQELMY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaaaaatggtgaagattcaatttccagatggaaagataaaggagttctctgca
ggtacgactgtcgcagatgttgcctcctatattagcccaagcttaaggaagaaagcagtg
gcaggaaagatcaatgaacaaatggtcgatgtcagtcatcagctggattgtgatgctcgg
ctgtctattgtcacactcgattcaaaagaagggcttgaagtgctgcgccatacatctgca
cacgtattagcccaagctgtgaaaaggttatacgacaatgtcacacttggaatcggacct
gttatcgaaaatggattttactatgacatgaagctgaatcaaacattaagtatagaggat
ttggctgctattgaaaaagaaatggaaaacatcataaacgagaatcatcatatccaaaga
aaggagatttcctacgaagaagctgaatcgttgtttgcacatgatccatataagctggat
attttaaaacatctcccctcagaagaggccatcacagtgtatcagcagggtgaatttatc
gacttatgccgcggtcctcatttaccttctactgggttcgtaaagtcatttaagctaaca
cgtgttgcaggggcttattggcggggggatagtcatcaagatgtattgcagcgagtgtat
ggtgtcgcgtttcaacatccaaaacaactagctgagtatcttcatttcatggaagaagca
aacaaacgtgatcaccgaaaattagggaaacaattatctctgttcatgttttcagaagaa
gcgccaggtatgccgttttatttaccaaaagggcagcttgtgagaaatgaattaatggcc
ttttcaagagaagttcgaagcaaagcgcaatatgaagaagtgagcacaccgtttatgatg
aaccaagagctatgggaaaagtcaggtcactgggatcattatcatgaaaatatgtatttc
tcagaagttgatcatacaagctttgctttaaaaccgatgaattgtccaggccatatgctt
atgtttaaaaatagcttattttcatacagagaccttccgatcagaatggctgagtttggt
caggtgcatcgtcatgaatttagcggagcattaaatggattgttcagggtcagaactttt
tgccaagatgatgcccatatttttttgagagaagatcaaattgaagctgaaatcaaacgg
attttccaattagttgatcatgtgtatcggacatttgggtttgagtactctgtggaacta
tccactcgtccagaaaaagcattaggggatgatgccatttgggatatttcagaatcagcg
ctaaagaatgtgcttgataggctaaaggtcgattaccagctaaatgaaggagatggggca
ttttatggtccgaagatcgattttcatattaaagatgccttgcagcgtagccatcagtgc
gccacaatccagctggattttcaaatgcctgagaaatttgatttaacatatatcaatgaa
aagaatgaaaaggtacggccagttgtgattcacagtgccattttcggttctcttgatcgt
ttccttggtattctcatcgagcattttgcaggtgccttcccattatggctggcaccagta
caagtacaaatcatccctgtctcaaaggttcacctcgaccactgccttgaggtgcagcag
caattaagaaagattggaatcagagtcacaatcgatgaacgggatgaaaaactcggctat
aaaatgagagaagcacaaatgcaaaaaatcccttatatcgctgtcattggcgatacagaa
atgcaagaaaaaacactgaatatcagacagcatggagaaaagacatctagacagctgtct
attgatgactttaaacacatggcggctcaacaaataaaagatagaacagctgctcaagaa
ttgatgtactaa
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