Bacillus pumilus SH-B9: UP12_05050
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Entry
UP12_05050 CDS
T04776
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bpus
Bacillus pumilus SH-B9
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpus03019
]
UP12_05050
Messenger RNA biogenesis [BR:
bpus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UP12_05050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AMM96725
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All DBs
Position
1048836..1049780
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AA seq
314 aa
AA seq
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MAKGIMTYDVGEQVDLHLLIKSSTKGIASNGKPFLTLILQDQSGDIEAKLWDAKQNDEQT
YAAQTIVKVVGDIHHYRGRNQLKLRNIRPVAENEQIRIDDFLETAPIPKHDMMDTIMQYI
FDMKNPNIQRVTRHLLKKYGQEFADYPAATKNHHEFVSGLAYHVVSMLHLAKSIVDLYPS
LDRDLLYSGIILHDLGKVKELSGPVSTTYTVEGNLIGHISIMVTEIAKAAEELGIDSEEI
LILQHLVLSHHGKGEWGSPKPPMVKEAEILHYIDNLDAKMNMMDRALEHVKPGEYTERIF
ALENRSFYKPAFHE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagggatcatgacctatgatgtcggcgaacaagttgacctgcatttattaatt
aaatcatctactaaagggattgcgagtaatggcaaaccatttttaacgttaattcttcaa
gatcaaagtggagatattgaggcgaaactatgggatgcgaagcagaatgatgaacaaacc
tatgccgcacaaaccattgtgaaggtagtaggcgatattcatcattatcgcgggaggaat
cagctgaaacttaggaatatacgccctgttgctgaaaatgagcaaattcgaatcgatgat
tttctcgaaacagctcctatcccaaagcatgatatgatggatacgattatgcaatatatt
tttgatatgaaaaaccctaatatacagcgtgtcacaagacatttgctaaaaaaatatgga
caggaattcgctgactatccagcagcgacaaaaaaccatcacgaatttgtctctggtctt
gcttatcacgtggtgtccatgctgcatttggctaaatcaattgttgatctatatccatct
ttagatcgagatcttttatattcaggcatcattcttcatgatttaggaaaagtcaaagag
ctttcaggcccagtctcaaccacctatacggtggaagggaatttaattggtcatatttcg
attatggtgacagaaattgcgaaagctgctgaggagctaggcattgattcagaagaaatt
ctgattctacagcacttagtcctaagtcatcacggaaaaggagagtggggcagcccaaaa
ccaccaatggtaaaggaagccgaaattctccactatattgataatttagatgcgaagatg
aatatgatggatcgtgcgcttgagcatgtgaagccaggagaatatacagaacgtattttt
gcgctagagaatcgttcattttataaaccagcctttcacgaataa
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