Bacillus pumilus SH-B9: UP12_05315
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Entry
UP12_05315 CDS
T04776
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bpus
Bacillus pumilus SH-B9
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpus03400
]
UP12_05315
Enzymes [BR:
bpus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UP12_05315
DNA repair and recombination proteins [BR:
bpus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
UP12_05315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
Dpoe2NT
Motif
Other DBs
NCBI-ProteinID:
AMM96776
LinkDB
All DBs
Position
1099121..1102630
Genome browser
AA seq
1169 aa
AA seq
DB search
MEIQFLAGRSGSGKTTAILEEIKEQLRLDPLDPPIIFLVPDQMTFLMEYELAKTSEAGGM
IRAKVFSFTRLAWSILQQTGGANRQFVTSTGIQMLLRKVIEEQKDKFKVFKKASDKPGFV
EQIEKTMAEFKRYCMLPEDIEKISVESMHSEYTEERRAAEKLHDLHVLYQQMEEHLQDEY
VHSEDYLTLLAQQIPSAEEIKGAHIYIDGFYQFTPQQLLVIEQLLLHAAKITAAFTVDRS
YHDRQPNELDLFRMTGKTYFQLYQLAKECGADISETIFERNHRHLYTPDLAYLEHQYEQR
PVQPYQENTPHLTVSKSANKRAEIEGVARDILDLVREKGLRLRDISIVARHVDDYKDTLK
EVFRDYDIPFFIDGNESMQYHPLIELIRSSLDVIKGNWRYEAVFRCVKTEFLFPLEITKN
KAREQADQLENYCIAYGVKGERWTNGSRFHYRRFQSLDEDFRQTDQEIEMEQMLNDVKEW
IAPPLYQLQKRLKNAQKVRDMVEAVYVFLEEIQVPDKLEKARLEAEEAGRLAEAMQHGQV
WDAVIQLMDEFVDMLGDEELSFPLFQQMIDTGLASLKFALIPPSLDQVFIGSMDLSRMYQ
VKCTFIIGVNDGVIPARPSDESVLSEDDREWLKRAGAELAETGKERLLDEQFLIYQALSS
PSHHLYLSYAASDAEGRSLLPSTLIKYCQELMPNHQQALYVLDPEQLEDNEQLKFVANEH
VSLSYTVSQLQQWLNQYPISGVWWSVYNYLMTSPNRDVSKNIMSSLFFTNRAKPLKPNVT
KELYGDHIQGSVSRMEKFNACAFSHFASHGLKLKDRQFYKLEAPDIGQLFHSALKHISDT
LVEQKKDWKNLTKEDCVTYSRHAIEQLAPRLQKEILLSSNRHAYIKEKLQKILIRVSSIL
SEHAKVSGFSPVGLELGFGGQGPLPPFTFQLKNGCTMELVGRIDRVDKAEGSKGLLLRIV
DYKSSEKGLDLAEVYYGLALQMLTYLDLTITYSKEWLGVEATPAGILYFHIHDPLIQAPI
PLAEDEIEQEIYKKFKMKGLLLEDVEAVKLMDQTLDSGRSQVIQAGLKKDGSFRSDSAVL
SEDHFHILTQHVRRTFEEAGERITNGEVTINPYKLKDQTPCRFCSFKSICQFDESIEDND
FRVLTSEKDDVVIDRIKKEGDQYANTKTE
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
gtggagattcagtttttagcaggcagatcggggagtggaaaaacgactgcaatcttagag
gaaatcaaagaacagcttcggcttgatccgttggatccgccaatcatttttttagtcccg
gatcaaatgacatttttaatggaatatgagcttgcgaaaacgtctgaagccggtggaatg
atcagagctaaagtttttagttttactcgtcttgcttggtctattttacagcagactggt
ggagcgaaccggcaatttgtgacaagcacaggaattcaaatgcttttaagaaaagtgatt
gaagagcagaaagacaagtttaaagtattcaaaaaagccagtgataagccagggtttgtg
gagcaaatcgaaaaaacgatggctgaatttaaaagatactgtatgctgcctgaggatatt
gagaaaatttcagtggagagcatgcattcagagtatacagaagaaagacgggcagccgaa
aaattgcatgatctccatgttctttatcagcagatggaggagcatttacaagatgaatat
gtgcactcagaagactatttgactcttcttgcccagcaaattccatcagctgaagaaata
aaaggagcacacatttatatcgatggtttttatcaatttacaccgcagcagcttcttgtc
attgaacagctcttgctccatgctgcaaaaataactgcggctttcacagtagatcgatcc
tatcatgataggcagccaaatgaacttgatttatttcgtatgacaggtaaaacgtatttc
cagctctatcagcttgctaaagagtgcggagctgacatttctgaaaccatttttgaaaga
aatcatcggcacctttatacaccagatcttgcttatttagaacaccaatatgagcagcgg
ccagtacagccatatcaggaaaacacccctcatctcacagtgtctaaaagtgcaaataaa
cgagctgaaattgagggagtagcgagagacatccttgatttagtgagagaaaaaggactc
agactccgagatatctcgattgtagcacggcatgtagacgactataaagatacgttaaaa
gaggtttttcgagattacgacattcctttttttattgatggaaatgaatcgatgcagtat
catccgctcattgaattgattcgttcgagcttggatgtcataaaaggaaattggcggtat
gaggcggtatttcgctgcgtgaaaacagagttcttatttccgcttgaaatcactaagaac
aaagcgagagagcaggcagatcagctcgaaaactattgtattgcttatggtgtaaaagga
gagcgctggacaaatggttcccggtttcattacaggcgcttccaatcattagatgaggat
ttcaggcaaacagatcaagaaatcgaaatggaacaaatgctaaatgatgtcaaagaatgg
atcgcgcccccgctttaccagttgcagaaaagacttaaaaatgcacaaaaggtaagggac
atggtagaggctgtctatgtctttttagaagagatacaagtaccagataagcttgaaaaa
gcgaggcttgaggctgaagaagcaggtcgattagctgaagcaatgcagcacgggcaagta
tgggatgctgtgattcaattaatggatgaatttgttgacatgctaggtgacgaagagctc
tcatttcctttattccaacagatgatagatacaggattagcttctctaaaattcgctttg
attccgccttcactcgatcaagtatttatcggaagtatggatttatccagaatgtatcaa
gtgaagtgtacgtttatcattggtgtaaacgatggcgttattcccgcacgcccctctgat
gagagtgtattgtctgaggatgaccgagaatggttaaaacgagcaggagcagagctggca
gagacaggaaaagaacggctgctagatgagcaatttttaatttaccaagcgttatcaagt
ccatcccatcatttgtatctatcctatgcggcttctgatgcagaaggacgttctttattg
ccttcaacactcatcaagtattgccaagagcttatgccaaatcatcagcaggctctttat
gtattagatccagaacagctggaagacaatgagcaattaaaatttgtagcgaatgagcat
gtatcgttgtcgtatactgtctcacagctgcagcaatggctcaatcaatatcccattagc
ggtgtatggtggagtgtctataactacttaatgacatctcctaatcgggatgtatcaaaa
aacatcatgtcaagtttgttctttacaaatcgagcgaagcctttaaagccaaatgtcaca
aaagagctttacggtgatcatattcagggcagtgtttcaagaatggagaaattcaatgcg
tgtgcattttctcactttgcttcccacggtttaaaacttaaggatcgacaattttacaaa
ttggaagcacccgatatcggccagctgtttcactcggctttgaagcatatttcagatacg
ctagttgaacaaaaaaaggattggaaaaacctaacgaaggaagattgtgtcacctattca
agacatgcaatcgaacagcttgctccgcgtcttcaaaaggaaattctattaagctctaat
cggcatgcttatattaaagaaaagctccagaaaatcttaattcgagtctcttctatatta
agtgaacatgccaaagtgagtggattttctccagtagggcttgagttaggtttcgggggg
caaggacctttgccgccgtttacttttcaattaaagaatggctgcacgatggaacttgtc
ggaagaattgacagggtagataaagcagaaggttcaaaagggctgcttttaagaatcgtc
gattacaaatccagtgagaaaggtcttgacctagcagaagtatactatggtcttgccttg
caaatgctcacatacttagacctaaccattacgtattcgaaagagtggctcggcgtagaa
gcaacgcctgctggcattttatatttccatattcatgatccgctcattcaagcaccaatt
ccgcttgcagaagatgaaattgagcaggaaatatacaagaaatttaaaatgaagggttta
ttgcttgaagatgtggaagcagtaaagctaatggatcaaacgcttgattcaggtagatcg
caagtcattcaagctggcttgaaaaaggatgggtctttccgttctgattcggcagtttta
agtgaagatcatttccatatactcacacaacacgttcggcgtacatttgaagaagcaggc
gaaagaattacaaatggagaggtcacaattaatccatataaattaaaggatcaaacacct
tgccgcttttgttctttcaagtctatttgccaattcgatgaatcaatagaagataatgat
tttagagtgctcacctctgaaaaggacgatgttgtgatagaccggatcaaaaaagaaggg
gatcagtatgcaaataccaaaaccgaataa
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