Bacillus pumilus SH-B9: UP12_07195
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Entry
UP12_07195 CDS
T04776
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bpus
Bacillus pumilus SH-B9
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpus03400
]
UP12_07195
Enzymes [BR:
bpus01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
UP12_07195
DNA repair and recombination proteins [BR:
bpus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
UP12_07195
Prokaryotic type
UP12_07195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMM97138
LinkDB
All DBs
Position
1465881..1467314
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AA seq
477 aa
AA seq
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MEIVVIWFRRDLRLDDHIALSKAITYAKKHEYKLLALYHLDPFFTEMEMDINNEHFFQSL
AHFVKEASESQVYVHLLHDDVLRAFQQVMDVYDIKAVFFNEDEVGIGQRRDKQVTDFLGK
KGIHVSMWQDTHLHGARDILKADGSHYQVFTPYYQSWRKQEKQPVIKVDKSFFSSGHTIC
DESLSQKGNDKLRELIKGCSRKFDQIGSDKAMSTLHHFIQKRLTRYHEKRDIPSVFGTSK
LSRFLKTGTISIRTIFHLIYEEALYEDEGRETFIKELAWRDFYHMIYAHYPEMKEKEINL
AFQGMKWNEDETLFEAWCKGETGFPLVDAGMRQLNEEGWMHNRLRMVTASFLTKDYLIDW
RKGEAYFAKKLVDYDEASNIGGFQWAASVGTDAVPYFRIFNPATQSKRFDPSGEYIRKYV
PELEYVDEKWIHEPSKMPIDEQLKSGCVLGDTYPLPTVDHQERRKKAISLFEEAKQQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
ttggaaattgtcgtgatttggtttcgccgagatctgcgattggatgatcatatcgccttg
tcaaaagcgatcacatatgcaaaaaaacatgagtacaaattattggctctttatcatcta
gatccattttttactgaaatggaaatggatataaataacgaacatttctttcaaagcttg
gcgcatttcgtcaaggaagcgagcgaatctcaagtgtatgtccaccttctccatgatgat
gtcctccgcgcctttcagcaggtcatggatgtgtatgacatcaaagccgtcttttttaat
gaagatgaagtgggtatcggccaaaggcgtgacaagcaagtaaccgattttttaggtaag
aagggcattcatgtgtcaatgtggcaagatacacatcttcacggggcgcgagatatttta
aaagcagatgggtcacattatcaagtgtttaccccatactatcaatcatggcgtaagcaa
gagaagcagcctgtgataaaagttgacaaatcattttttagcagtgggcatacgatttgt
gatgagtcactttcacaaaaaggaaatgataaactgcgagaattgataaagggctgctca
aggaagtttgatcaaattggctcagacaaagcgatgagcacgctgcatcactttatccaa
aaaagattaacacgttaccatgagaaacgtgatattccgtctgtttttggaacgagcaag
ctgtcgcggttcttaaaaacaggtactatttcaattcgaacgatctttcatttgatatat
gaagaagcactctatgaagatgagggcagagagacctttattaaagagctggcttggcgt
gatttttatcatatgatttatgcgcattatcccgagatgaaagaaaaagaaatcaatttg
gcgtttcaagggatgaaatggaatgaagatgagacgctgtttgaagcttggtgtaaagga
gaaacaggctttccactcgttgatgcagggatgagacagttaaatgaggagggctggatg
cataaccgtttgcgaatggtcacagcctcatttttaacaaaggattatttgattgattgg
agaaagggcgaagcgtattttgcaaaaaaacttgtggattatgatgaggcgtcaaatatc
ggaggatttcagtgggcagcctcagtcggaactgatgcggtgccgtacttccgtattttc
aacccggccactcagtcaaagcgatttgatccgagcggagaatatattagaaaatatgta
ccagagctagagtatgtcgatgaaaaatggattcatgaaccaagtaaaatgccgattgat
gagcaattgaaatcgggatgtgtgctaggtgatacatatccgctgccgacggtagaccac
caggaaagacgcaaaaaagccatttcgctatttgaagaagcaaaacaacaataa
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