KEGG   Bacillus pumilus SH-B9: UP12_07650
Entry
UP12_07650        CDS       T04776                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
bpus  Bacillus pumilus SH-B9
Pathway
bpus03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    UP12_07650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpus03400]
    UP12_07650
Enzymes [BR:bpus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     UP12_07650
DNA repair and recombination proteins [BR:bpus03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     UP12_07650
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C Zn_ribbon_PriA AAA_30 AAA_19 Zn_ribbon_6 PIF1 AAA_16 Cas3-like_C_2 SLFN-g3_helicase POLR3C_WHD Helicase_C_2 HypA Zot IBR_1 Zn_ribbon_PF0610
Other DBs
NCBI-ProteinID: AMM97222
LinkDB
Position
1557212..1559620
AA seq 802 aa
MIAEVIVDVTTKAIDRPFDYRVPDRFKDLVKAGMRVVVPFGPRKIQGFVTKVKEETDVKT
GSIKDIVDLFDLSPVLTDELLELSHWLTEKTLSYHITALQSMLPAAMKAKYEKEIQVLSD
EELPQSLKELFGQRDSILYADIPAEQLKQIQKHVQKGHLEVRYHVSQKSGKKKVRTLQLA
TSKDKLEEKQQQLKKNAVKQKALLSFLLQASETTFLAKDLQQQTSASSQTLKTFIQEGLL
TESYEEVYRDPYRDRAFTPSASLDLMPEQREAAKHIHQAVSDDRHETFLLHGVTGSGKTE
IYLQTIDHALQKGKEAIVLVPEISLTPQMVQRFKERFGSNVAVLHSGLSTGEKYDEWRKI
HRKEVKLVVGARSAVFAPFENLGMIIIDEEHESSYKQEEMPRYHAKDVAIERARRHRCPV
VLGSATPSLETYARAKKGVFTLLTLKNRVNQQQLPHVSLIDMREELRNGNRSMFSEELMI
RLKEVLERKEQAVLFLNKRGYSSFVMCRDCGYVEQCPHCEISLTYHRYQKRLKCHYCGHE
APVPAECPECHSEHIRYFGTGTQRVEEELTKVLPEARVIRMDVDTTSRKGAHEKLLTSFG
NKEADILLGTQMIAKGLDFPDVTLVGVLSADTSLHIPDFRSSEKTFQLLTQVSGRAGRHE
KAGSVIIQSYTPSHYSIELTKQHDYEAFYEQEMLHRRNQSYPPYYFLAMVTVSHEEVTKA
AHVTDQIVQFLKMNCAPNTRILGPAASPIAKIKDRYRYQCVIKYKRENELASLLRKIQDH
YQKEMEQKQLMISIDMNPYMMM
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgattgctgaagtcatcgtagatgtcacaacgaaagccattgaccggccattcgattac
cgtgtaccagatcgcttcaaagatctcgtcaaagcgggaatgagggtggtcgttcccttt
ggcccgaggaagattcaagggtttgtgacaaaagtcaaagaagaaacagacgtaaaaaca
ggaagcataaaggacattgtcgatttatttgacttatcacctgttctgacagatgagcta
ttggagctttcccactggctgacggaaaaaacgttgtcctatcacattacggcacttcaa
tcgatgctccctgcagccatgaaggcgaaatatgaaaaagaaattcaagtgctgtcagat
gaagaacttccgcagtcattgaaagagcttttcggtcagcgagatagcattctttatgct
gacatcccagccgaacaactaaaacagattcaaaagcatgtccaaaaaggtcatttagag
gtaaggtatcacgtctcgcaaaaatctggaaagaaaaaagtgcgcacgctccaactagct
acatccaaagataagcttgaagaaaaacagcagcagctgaagaaaaatgcggtgaaacaa
aaggcattgctctcctttttgcttcaagcgagtgagacaacctttttagcgaaagacttg
cagcagcaaacaagcgcgagttctcaaacgcttaaaacctttattcaagaagggctacta
acagaaagctatgaagaggtctaccgggatccttatcgtgaccgggcgtttacaccttct
gcttcacttgacctcatgccagaacaaagagaagcggcaaaacatattcatcaagcagtc
agtgatgaccggcatgaaacttttctgctgcacggggtaacaggaagcggtaaaacggaa
atatacttgcagacgattgatcatgccctgcaaaaaggaaaagaagcgatcgtcctcgtt
ccagaaatctcgttaacccctcaaatggttcagcggtttaaagaacggttcggttcaaat
gtggctgtacttcacagcggcttatcgacaggggaaaaatatgatgaatggcggaaaatt
caccgcaaggaagtcaagcttgtcgtgggtgcgagatcggctgttttcgcaccatttgaa
aatctaggcatgattatcatagatgaagagcatgaatcttcttataaacaagaggaaatg
cctcgttatcatgccaaggacgtcgctattgaacgagccagaaggcatcgatgcccagtc
gttttaggcagtgctaccccttcacttgaaacctacgcgcgtgccaaaaaaggcgtgttt
acattgctgacgctcaaaaaccgagtcaaccagcagcagctgccgcacgtttcgttaatt
gatatgagagaagaattgagaaatggcaacaggtccatgttttcagaagaattaatgatc
agattaaaggaagtgcttgaaagaaaagaacaagccgtcttatttctgaataaaaggggc
tattcatcctttgtgatgtgccgtgattgcggatatgtcgagcaatgtcctcattgcgaa
atttctctcacctatcaccgctatcaaaaacggctgaaatgccattattgcgggcacgag
gcaccggtgccagctgaatgtccagaatgccatagtgagcatattcgctattttggtacg
ggtacgcagcgtgtagaagaagagctgactaaagtactgccagaggcaagagtcatccga
atggatgtcgatacaacgtctcgtaaaggtgctcacgaaaagctcctcacatcttttggc
aataaagaagcagatattttgctcgggacgcagatgattgcaaaagggctggatttcccc
gatgtcacacttgttggtgttctaagtgccgatacgtctcttcatatccctgatttccgt
tcaagtgaaaaaacatttcagcttctcacgcaggtcagcggcagggcaggacgacatgaa
aaagcaggctctgtgatcattcaatcgtatacgccttctcattatagtattgaattaacg
aagcagcatgactatgaagccttttatgaacaggagatgctgcatcgccgcaaccagtcc
tatccgccgtattactttttggcgatggtgacagtatcacatgaggaagtgacgaaggca
gcgcatgttacggatcaaattgttcagttcctaaaaatgaactgtgcaccgaatacaagg
atccttggtccggctgcatcaccaatcgctaagatcaaagatagatatcgatatcaatgc
gtgataaaatacaaaagggaaaatgaactggcaagtttactacggaaaatacaagaccat
tatcaaaaggaaatggaacaaaaacaattgatgatttcaatagatatgaatccatatatg
atgatgtaa

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