Bacillus pumilus SH-B9: UP12_07650
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Entry
UP12_07650 CDS
T04776
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bpus
Bacillus pumilus SH-B9
Pathway
bpus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UP12_07650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpus03400
]
UP12_07650
Enzymes [BR:
bpus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UP12_07650
DNA repair and recombination proteins [BR:
bpus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UP12_07650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
Zn_ribbon_6
PIF1
AAA_16
Cas3-like_C_2
SLFN-g3_helicase
POLR3C_WHD
Helicase_C_2
HypA
Zot
IBR_1
Zn_ribbon_PF0610
Motif
Other DBs
NCBI-ProteinID:
AMM97222
LinkDB
All DBs
Position
1557212..1559620
Genome browser
AA seq
802 aa
AA seq
DB search
MIAEVIVDVTTKAIDRPFDYRVPDRFKDLVKAGMRVVVPFGPRKIQGFVTKVKEETDVKT
GSIKDIVDLFDLSPVLTDELLELSHWLTEKTLSYHITALQSMLPAAMKAKYEKEIQVLSD
EELPQSLKELFGQRDSILYADIPAEQLKQIQKHVQKGHLEVRYHVSQKSGKKKVRTLQLA
TSKDKLEEKQQQLKKNAVKQKALLSFLLQASETTFLAKDLQQQTSASSQTLKTFIQEGLL
TESYEEVYRDPYRDRAFTPSASLDLMPEQREAAKHIHQAVSDDRHETFLLHGVTGSGKTE
IYLQTIDHALQKGKEAIVLVPEISLTPQMVQRFKERFGSNVAVLHSGLSTGEKYDEWRKI
HRKEVKLVVGARSAVFAPFENLGMIIIDEEHESSYKQEEMPRYHAKDVAIERARRHRCPV
VLGSATPSLETYARAKKGVFTLLTLKNRVNQQQLPHVSLIDMREELRNGNRSMFSEELMI
RLKEVLERKEQAVLFLNKRGYSSFVMCRDCGYVEQCPHCEISLTYHRYQKRLKCHYCGHE
APVPAECPECHSEHIRYFGTGTQRVEEELTKVLPEARVIRMDVDTTSRKGAHEKLLTSFG
NKEADILLGTQMIAKGLDFPDVTLVGVLSADTSLHIPDFRSSEKTFQLLTQVSGRAGRHE
KAGSVIIQSYTPSHYSIELTKQHDYEAFYEQEMLHRRNQSYPPYYFLAMVTVSHEEVTKA
AHVTDQIVQFLKMNCAPNTRILGPAASPIAKIKDRYRYQCVIKYKRENELASLLRKIQDH
YQKEMEQKQLMISIDMNPYMMM
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgaagtcatcgtagatgtcacaacgaaagccattgaccggccattcgattac
cgtgtaccagatcgcttcaaagatctcgtcaaagcgggaatgagggtggtcgttcccttt
ggcccgaggaagattcaagggtttgtgacaaaagtcaaagaagaaacagacgtaaaaaca
ggaagcataaaggacattgtcgatttatttgacttatcacctgttctgacagatgagcta
ttggagctttcccactggctgacggaaaaaacgttgtcctatcacattacggcacttcaa
tcgatgctccctgcagccatgaaggcgaaatatgaaaaagaaattcaagtgctgtcagat
gaagaacttccgcagtcattgaaagagcttttcggtcagcgagatagcattctttatgct
gacatcccagccgaacaactaaaacagattcaaaagcatgtccaaaaaggtcatttagag
gtaaggtatcacgtctcgcaaaaatctggaaagaaaaaagtgcgcacgctccaactagct
acatccaaagataagcttgaagaaaaacagcagcagctgaagaaaaatgcggtgaaacaa
aaggcattgctctcctttttgcttcaagcgagtgagacaacctttttagcgaaagacttg
cagcagcaaacaagcgcgagttctcaaacgcttaaaacctttattcaagaagggctacta
acagaaagctatgaagaggtctaccgggatccttatcgtgaccgggcgtttacaccttct
gcttcacttgacctcatgccagaacaaagagaagcggcaaaacatattcatcaagcagtc
agtgatgaccggcatgaaacttttctgctgcacggggtaacaggaagcggtaaaacggaa
atatacttgcagacgattgatcatgccctgcaaaaaggaaaagaagcgatcgtcctcgtt
ccagaaatctcgttaacccctcaaatggttcagcggtttaaagaacggttcggttcaaat
gtggctgtacttcacagcggcttatcgacaggggaaaaatatgatgaatggcggaaaatt
caccgcaaggaagtcaagcttgtcgtgggtgcgagatcggctgttttcgcaccatttgaa
aatctaggcatgattatcatagatgaagagcatgaatcttcttataaacaagaggaaatg
cctcgttatcatgccaaggacgtcgctattgaacgagccagaaggcatcgatgcccagtc
gttttaggcagtgctaccccttcacttgaaacctacgcgcgtgccaaaaaaggcgtgttt
acattgctgacgctcaaaaaccgagtcaaccagcagcagctgccgcacgtttcgttaatt
gatatgagagaagaattgagaaatggcaacaggtccatgttttcagaagaattaatgatc
agattaaaggaagtgcttgaaagaaaagaacaagccgtcttatttctgaataaaaggggc
tattcatcctttgtgatgtgccgtgattgcggatatgtcgagcaatgtcctcattgcgaa
atttctctcacctatcaccgctatcaaaaacggctgaaatgccattattgcgggcacgag
gcaccggtgccagctgaatgtccagaatgccatagtgagcatattcgctattttggtacg
ggtacgcagcgtgtagaagaagagctgactaaagtactgccagaggcaagagtcatccga
atggatgtcgatacaacgtctcgtaaaggtgctcacgaaaagctcctcacatcttttggc
aataaagaagcagatattttgctcgggacgcagatgattgcaaaagggctggatttcccc
gatgtcacacttgttggtgttctaagtgccgatacgtctcttcatatccctgatttccgt
tcaagtgaaaaaacatttcagcttctcacgcaggtcagcggcagggcaggacgacatgaa
aaagcaggctctgtgatcattcaatcgtatacgccttctcattatagtattgaattaacg
aagcagcatgactatgaagccttttatgaacaggagatgctgcatcgccgcaaccagtcc
tatccgccgtattactttttggcgatggtgacagtatcacatgaggaagtgacgaaggca
gcgcatgttacggatcaaattgttcagttcctaaaaatgaactgtgcaccgaatacaagg
atccttggtccggctgcatcaccaatcgctaagatcaaagatagatatcgatatcaatgc
gtgataaaatacaaaagggaaaatgaactggcaagtttactacggaaaatacaagaccat
tatcaaaaggaaatggaacaaaaacaattgatgatttcaatagatatgaatccatatatg
atgatgtaa
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