Bacillus pumilus SH-B9: UP12_08145
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Entry
UP12_08145 CDS
T04776
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bpus
Bacillus pumilus SH-B9
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpus03016
]
UP12_08145 (truB)
Enzymes [BR:
bpus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
UP12_08145 (truB)
Transfer RNA biogenesis [BR:
bpus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UP12_08145 (truB)
Prokaryotic type
UP12_08145 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AMM97318
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All DBs
Position
1656062..1656991
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AA seq
309 aa
AA seq
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MINGVLLLHKERGMTSHDCVFKVRKILHTKKVGHTGTLDPEVSGVLPICIGRATKIVEYL
TDKSKTYDAEITIGFSTTTEDQTGEIVEEKKVQNPISEEEIDAVLKQFQGTIEQIPPMFS
AVKIGGKKLYEYAREGIEIERPSREITIHRIERTTPALFENGKVSFRFTVLCSKGTYVRT
LAVDIGKKLGFPAHMSHLIRTGSGDFTLDECITLDELRDISEEGTVDEHLVPIERALNHL
PKWEINDTLASKVENGAVLPMPDEFAHFAEEDRVAVFAPSGRCMAIYMKHPTKQNLMKPA
KILSQDKQS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgataaatggtgttcttttattacataaagaaagagggatgacctctcacgactgtgtg
ttcaaagtgagaaagatcctgcatacaaaaaaagtgggacatacaggtaccctcgacccc
gaggtatcaggtgttttgcccatttgtatcggaagagcaacgaagattgtcgaatactta
acagataaatcaaaaacgtatgacgcagaaatcacgattggtttttctacaacaacagaa
gaccaaacaggtgagatcgtagaagaaaaaaaggtgcaaaatcccatctcagaagaagaa
attgatgctgtgctgaaacagtttcaaggaaccattgaacaaattccacctatgttttcg
gcagtgaaaattggcgggaaaaagctctatgaatatgcaagagaaggcattgaaattgag
cgaccgagccgtgaaattacgattcaccgtatcgagcggacaacacctgctttatttgaa
aatggaaaagtatcatttagattcaccgttttatgttcaaaaggaacatatgtcagaacc
ttagcggttgatattggaaagaaactaggattcccagctcatatgtcacacctcattcgc
acaggatcaggtgattttacactagatgagtgcatcacccttgatgagctgcgagatata
agcgaagaaggtacagtagatgagcaccttgtcccgatcgagcgtgcgctcaatcatttg
ccgaaatgggagataaatgatacattagcaagtaaagtggaaaacggtgcagtcctgcca
atgcctgatgaattcgctcatttcgcagaggaagatcgtgtcgctgtctttgctccttca
ggccggtgtatggcgatatatatgaagcacccgaccaaacagaatctaatgaagccggcg
aagatcttatctcaggacaagcaatcttaa
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