KEGG   Bacillus pumilus SH-B9: UP12_08800
Entry
UP12_08800        CDS       T04776                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
bpus  Bacillus pumilus SH-B9
Brite
KEGG Orthology (KO) [BR:bpus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpus03032]
    UP12_08800 (gyrB)
   03036 Chromosome and associated proteins [BR:bpus03036]
    UP12_08800 (gyrB)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bpus02048]
    UP12_08800 (gyrB)
Enzymes [BR:bpus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     UP12_08800 (gyrB)
DNA replication proteins [BR:bpus03032]
 Prokaryotic type
  DNA Topoisomerases
   UP12_08800 (gyrB)
Chromosome and associated proteins [BR:bpus03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    UP12_08800 (gyrB)
Prokaryotic defense system [BR:bpus02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    UP12_08800 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 TOPRIM_C OAM_alpha
Other DBs
NCBI-ProteinID: AMM97438
LinkDB
Position
1784666..1786633
AA seq 655 aa
MVKKQQVDYNDDSIQVLEGLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNSVDEVLAGHGD
HIVVKIHKDNSISVQDKGRGMPTGMHKLGKPTPEIILTVLHAGGKFGQGGYKTSGGLHGV
GASVVNALSEWLTVTIERDGYIYHQRFENGGKPVTSLEKVGKTKKTGTLIHFKPDRSMFS
VTTYNFDTLSERLRESAFLLKGLKIELIDERHDVQETFYYETGIEAFVAYLNEEKDVLSE
VVSFEGEHQSIEVDFAFQFNDGYSENILSFVNNVRTKDGGTHESGAKTAMTRAFNEYARK
VALLKEKDKNLEGTDIREGLSAIISVRIPEELLQFEGQTKGKLGTSEARSAVDAVISEKL
AYFLEENRETATLLVRKAIKAQQAREAARRAREEARSGKKRKKSEATLSGKLTPAQSRNP
ARNELYLVEGDSAGGSAKQGRDRKFQAVLPLRGKVINTEKAKLADIFKNEEINTIIHAIG
GGVGVDFNVEDINYDKIVIMTDADTDGAHIQVLLLTFFYRYMKPLIEHGKVFIALPPLYK
VSKGSGKKEVIEYAWSDEEMDDVLKKVGKGYTIQRYKGLGEMNADQLWETTMNPESRTLV
RVKIDDAARVERRVTTLMGDKVEPRRKWIEKNVAFGLDEESNILENENLSLAEEV
NT seq 1968 nt   +upstreamnt  +downstreamnt
ttggttaaaaagcagcaagtagattataacgatgattctattcaggtgctagagggactt
gaagcggtccgtaaacgtccagggatgtatattgggtcaacggattcacgcggtcttcat
caccttgtctatgagattgtagacaactctgtcgatgaagtactcgctggccatggagat
catatcgttgtcaaaatacataaagataacagcatttccgtccaggataaaggacgcggg
atgcctactggtatgcataagcttggaaaaccgacacctgagatcattttaacggtcctt
cacgcaggcggaaaatttggtcaaggcggatataaaacaagtggtgggcttcacggagtt
ggggcatctgttgtaaacgcgctgtcagagtggctcactgtcacaattgaacgtgatgga
tatatatatcatcagcggtttgaaaacggcggaaaacctgtgacgtcacttgaaaaagtc
ggaaaaacgaaaaaaacgggaacactgattcattttaaaccagatcgatcgatgttcagc
gttacaacctataattttgatacgttatcagaacgtttaagagaatctgcctttttatta
aaaggattaaaaatagagctgattgatgaacgacatgatgtacaagaaaccttttattat
gagacgggcattgaagccttcgttgcttatttaaatgaagaaaaagatgttctgagtgaa
gtggtctcatttgaaggagagcatcaatccatcgaagtagactttgcttttcaattcaat
gacggctactcggaaaatattctttctttcgtcaataacgtgagaacaaaagatggcggt
acgcatgagtctggtgccaaaacggcgatgacgagagcctttaatgaatatgcgcgcaaa
gtagctcttttaaaagaaaaagacaaaaatttagaaggcactgatattcgcgaagggctg
tctgctattatttctgtcagaattcctgaagaactgcttcaatttgaaggccagacaaaa
ggaaagcttgggacaagtgaggctcgctccgctgttgatgctgttatttctgaaaagctg
gcttatttccttgaagaaaaccgggaaacagccactcttcttgtgagaaaagcgattaaa
gcgcagcaggcaagagaagctgctagaagagcacgtgaagaagcaaggagcggcaagaaa
cggaaaaagtccgaagcaacactgagcggaaaattaacacctgctcaatctagaaacccg
gcaagaaacgaattgtacctagtggagggcgactcagcgggcgggtcagcaaaacaagga
cgtgaccgtaaattccaagcggtgctgccgcttcgtggaaaggtcattaacacagaaaaa
gcgaaacttgctgatatttttaaaaatgaagaaatcaacaccattattcatgcgatcggt
ggaggcgtcggtgtcgattttaatgtagaagacatcaattatgacaaaatcgtgatcatg
acagatgctgacacagatggagcccatattcaagtgcttctgctaacgttcttctaccgc
tatatgaaaccgctgattgagcatggcaaagtgtttattgcactaccgcctttatataaa
gtcagcaaaggctcagggaaaaaagaagtgattgagtacgcatggtctgatgaagaaatg
gatgacgtactgaagaaagttggaaaagggtacacgattcaacgctataaaggtttaggt
gaaatgaacgccgaccagctatgggaaacgacaatgaatccagaatcgagaacacttgtc
agagtcaaaatcgacgatgctgcacgagttgaacgccgcgtcacgacattaatgggtgac
aaagtagagccacgtcgtaaatggattgagaagaatgtcgcctttggacttgatgaggaa
agtaacattcttgaaaatgaaaacttgtcgctagctgaggaggtttaa

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