KEGG   Bacillus pumilus SH-B9: UP12_10040
Entry
UP12_10040        CDS       T04776                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
bpus  Bacillus pumilus SH-B9
Brite
KEGG Orthology (KO) [BR:bpus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpus03400]
    UP12_10040
Enzymes [BR:bpus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     UP12_10040
DNA repair and recombination proteins [BR:bpus03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    UP12_10040
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII DEAD_2 Helicase_C Rv2179c-like DEDDh_C SYF2
Other DBs
NCBI-ProteinID: AMM97669
LinkDB
Position
complement(2037932..2040724)
AA seq 930 aa
MADQRFVVVDIETTGNSPKKGDKIIQIAAVVIENGQIVERYSKYVNPGKTIPGFIEQLTG
IQQHMVDDAVFFEDIAQEVYDLIQGAYFVAHNVHFDLNFLNDELKACGKNELDVLAIDTV
EISRILYPELEGYKLTELSEELMLPHDHPHRADSDAEVTAMLFLTLLHQLTHTPPNVLKQ
LRRLSSYLLSDIGFLIQQLEMSDASREDSLVEVGSFAVKDVTNSEKDTTDSVGEDDEQLF
EEIKKKLPQTVEGYEVREGQLKMMNKVRDVFHERAYALIEAAPGIGKTLAYLIPAALEAK
KSGKPVIISTYSILLQQQMLQRDVPILNQLLPFEPAASVFKGRAHYICLDKFEHVLHEED
DNYDVVLTKAQILMWLLVTETGDLSELNLPSGAANIKDRISCVHMPFTSKKRRFKEYCFY
ERAKRRAKTADLILTNHRLLLSQTEASSIFQHADVYVIDEAHQFEKTANETLGDSASYIQ
LHAKLTQLGSLQGGLLKKLKKRFHGAGLQTDTFIEMDEYLQQLQMESDAFFSTVHSFVKR
TKPKADINRLIHRVRHQSKHAQWKRIKETASKLCSLLIACEKLYEQQKSELLQKSDQLTE
HFAFEAEEYDQVMSFMHTFCSTLYRFIFEPKNDETVWIEIDAKGAKNAVFMHAQPLDTGE
LLADRFFMNKKSVVLTSGTLTINGRFDYCLERFGLQDFYPHLVQIESPFELEKQLKVIVP
ADMPPITNRDERDYVKQAVRYIKIMEKQQQAKILVLFNSHEMLKAVYDELKTEGMQAALF
AQGLTGGSPVKLTKMFKLAKHAILLGTGSFWEGVDFPGSELTTVIMARLPFRPPDSPLIE
AKCDAAKKQGKNPFKAVALPEAVLTFKQGAGRLLRSEKDIGTLLILDRRVKTASYGKLFL
ESLPHAPVHEMSKESLEAYIEKLKNEKPLS
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggccgatcaaaggtttgttgtcgttgatattgaaaccaccggaaattcacctaagaag
ggtgataaaatcattcaaattgctgcggtggtcattgaaaatggacaaattgtcgaacgg
tattcaaaatatgtgaacccgggaaaaacgatccctggatttattgaacagctgacaggc
attcagcagcatatggtagacgatgcagtgttttttgaggacattgcccaagaggtgtat
gatctcattcaaggcgcttattttgttgcgcacaatgttcattttgacttgaacttttta
aatgatgaactaaaagcatgcgggaaaaatgagctggatgtgctagcgattgatacagtt
gaaatttctagaattctttatccagagcttgaaggctataagctcactgaattaagtgaa
gagctcatgcttccacatgaccacccgcacagggcggatagtgatgcggaagttactgcc
atgttatttttaaccttactccatcaattgacacatacaccgccaaatgtgcttaagcag
ctgcgcagattatcctcttatctcttaagtgatattggatttttaatccagcagcttgaa
atgagtgatgccagccgtgaagattctttggtagaagtaggctcttttgctgttaaagat
gtcaccaattctgaaaaggatacgacagattcagtaggggaagacgatgaacagctgttt
gaggagatcaaaaagaagcttccccaaacggtggaaggctatgaagtaagagaaggccag
ctcaagatgatgaataaagtaagagatgtgtttcatgaaagagcttatgctttaattgaa
gcggcaccaggtattggaaaaacgctggcatacctcataccagccgcattagaagcaaaa
aaatcaggaaaacctgtcattattagtacatattccattcttttgcagcagcaaatgctt
cagcgtgatgtgccgattttaaatcaattgcttccatttgagccagcagccagtgtattc
aaaggccgagcgcattatatttgcttagataagtttgagcatgtgctgcatgaggaagat
gataactatgatgtggtcttaacgaaggcgcaaatattaatgtggctccttgtgacagaa
acgggtgatttatctgaactaaatttaccttcaggagctgccaatataaaagaccggatt
tcgtgtgtgcacatgccatttacatcgaaaaagcgccgctttaaggaatattgcttttat
gagcgtgcaaaaagaagggcgaaaacagctgatttaattttaacgaatcatcgcttgctc
ttatcacaaacggaagcatcatctatctttcagcatgcagacgtatatgtgattgacgag
gctcaccaatttgagaaaacagccaatgaaacgctaggggatagtgcgtcgtatatccag
cttcatgcgaaattaacacagcttggctcattacagggcggtctgttaaagaagctgaaa
aagagatttcacggtgccggcttacagacggacacctttatcgaaatggatgagtatctt
cagcagcttcaaatggaaagtgacgccttctttagtaccgttcattcttttgtgaaaagg
acaaaaccaaaagcagacatcaatcgtctcattcatagagtacgtcatcagtcgaagcat
gcgcagtggaaacggattaaagagacggcaagtaagctttgttccttgttaattgcttgt
gaaaagctgtatgaacagcaaaaaagcgagcttcttcaaaaaagtgatcagctgacagaa
cactttgcgtttgaagcagaggaatacgatcaagtgatgtcgtttatgcatacattttgc
agtacgctgtaccggttcatttttgaaccgaaaaacgatgaaacggtttggattgagatc
gatgcaaagggtgccaaaaatgctgtctttatgcatgcacagccgctagataccggcgag
cttttagcggatcgattttttatgaacaaaaaaagtgttgtcctcacatcagggacactc
acaattaatggtcgttttgattattgcttagaacgatttggtctgcaagatttttatccg
catcttgtacagattgagtcaccgtttgaacttgagaaacagctcaaggtgattgtacca
gctgatatgccgccgattacgaaccgtgatgagcgtgactatgtaaagcaagcagtacgg
tacattaagataatggaaaagcagcaacaagcgaaaatattggtgttgtttaattcacat
gagatgttaaaagcagtgtatgatgaactgaaaacagaagggatgcaagccgcccttttt
gcccaaggtctgacgggcggtagtcctgttaaattaacgaagatgttcaaattagcaaaa
catgcaattttacttggtacgggtagtttttgggaaggtgtcgattttcctggatcagag
ctgacaacagttattatggcacgtcttccgtttcggccgcctgattcaccgctcattgaa
gcaaaatgtgatgccgctaaaaaacaggggaagaacccgtttaaagccgttgctctccca
gaagctgtgttaacctttaaacaaggtgcaggacgcttgctgcgctctgaaaaagacata
gggacattgctcattttagaccgccgagtgaaaaccgcgtcatatggaaagctattttta
gaatcactccctcatgcgccagtccacgagatgtcaaaagaatcacttgaggcgtatata
gagaaactcaaaaacgaaaagccgctgtcataa

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