Bacillus pumilus SH-B9: UP12_12105
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Entry
UP12_12105 CDS
T04776
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
bpus
Bacillus pumilus SH-B9
Pathway
bpus02024
Quorum sensing
bpus03060
Protein export
bpus03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
UP12_12105
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
UP12_12105
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UP12_12105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bpus02044
]
UP12_12105
Secretion system [BR:
bpus02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
UP12_12105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecD_1st
SecDF_P1_head
MMPL
Sec_GG
Motif
Other DBs
NCBI-ProteinID:
AMM98050
LinkDB
All DBs
Position
complement(2424542..2426770)
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AA seq
742 aa
AA seq
DB search
MKKGRILAFFLVVLLIGTGVGLLTKPVAKDMTLGLDLQGGFEVLYDVHPVKKEDKITNSV
LVSTVEALNRRANVLGVSEPNISIEGNNRIRVQLAGVKDQNRAREILSTEAQLSFRDTND
KELLNGADLVENSAKQTFSQTNEPIVTVKLKDAKKFGDVTRKVAAMAPNNQLVIWLDYHK
GDSFKKEVSKSNHKYVSAPNVNQEINSSDVQIEGKFTVQEAKDLASILNAGALPVKLTEK
YSTSVSAQFGEQALNETVFAGIVGIALIFLFMLFYYRIPGLIAVITLSTYIYITLQVFDW
MGAVLTLPGIAALILGVGMAVDANIITYERIKEELKLGKSVRSAFRSGNRRSFATIFDAN
LTSIIAGGVLFFFGTSSVKGFATMLILSILTSFITAVFLSRFLLGLLVESRALDRKKGWF
GVRQKDIIDIHETTENTEPKTLFDKWDFVSKRKGFMIFSVAITIAGIIVLSIFKLNAGID
FASGTRVDIQSDHKLSTAQIEQDFQKLDLDTDSVVLSGQKENQAAARFVGVPNKEKIAEV
KDYFKDKYGTEPNVSTVSPTVGKELARNAIYAIIIASIGIIIYVSIRFEYKMAIAAIASL
LYDAFFIVAFFSITRLEVDVTFIAAILTVIGYSINDTIVTFDRVREQMKKRKPKTVEDLS
YIVNLSLQQTFTRSINTVLTVVIVVIALLIFGSASITNFSLALLVGLLTGVYSSLYIAAQ
IWLMWKGRELKKPAKIDTEQDI
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagggcgcattcttgcgtttttcttagtggttctgttaatcggaactggcgta
ggcttactaacaaagcctgttgcgaaagatatgacgctagggctggatttacagggtgga
tttgaagtcctgtatgatgtacatccagtgaaaaaagaggacaagattacaaatagtgtc
ctcgtcagtacggtggaggctttaaaccgaagagccaatgtgctaggtgtaagtgagccg
aacatctcgattgaaggcaacaatcgtatccgtgtgcagcttgctggggtaaaagatcaa
aacagagctagggagatactttccactgaagcacagctatccttcagagatacgaatgat
aaagaactcctaaacggggctgacctagtcgaaaacagtgcaaaacaaacattcagtcaa
acgaatgagccaattgtgacggttaaactaaaggatgcgaaaaaatttggtgacgtcaca
agaaaagtagcggcgatggcgccgaataaccagcttgtcatttggcttgattaccacaaa
ggagattccttcaaaaaagaagtctcaaaatcaaaccacaagtatgtctctgcgccgaat
gtgaatcaagaaattaacagcagtgacgtgcaaattgaagggaaatttactgtccaagag
gcaaaagaccttgcaagtattttaaatgctggggcattgccagtgaaattaactgaaaag
tactccacatcagtgagtgcgcaattcggtgaacaggcattaaatgaaactgtctttgca
gggattgtgggaattgccctcattttcttattcatgcttttttattaccgaatacctggt
cttattgctgtcattacgttatcaacgtatatctatattaccttacaggtgtttgactgg
atgggggctgttctgacacttcctggaattgcggcactgattcttggagtagggatggcg
gttgatgccaacatcatcacatatgaacgaatcaaagaggagcttaagctcggtaaatct
gtccgctctgctttcaggtcagggaaccgccgatcatttgcgaccatctttgatgcaaac
ttaacgagtattattgcagggggcgtccttttcttcttcgggacaagttctgtaaaaggg
tttgcgacgatgctgatcctttccattttaacaagctttattacagctgtattcctatca
agattccttcttggtctgcttgtggaaagccgagcgcttgatcgcaagaaaggctggttt
ggtgttcgtcaaaaagacatcatcgatattcatgaaacaacagaaaatacggaaccaaaa
acactatttgataaatgggattttgtcagcaagcgaaaaggtttcatgattttctcagta
gccattaccattgcggggattatcgtcctttcgattttcaaactcaatgcgggtattgac
tttgcaagtggtacaagagtagacattcaaagtgaccacaagctgtcaactgctcaaatc
gagcaagactttcaaaaattagatctggatacagatagtgttgtgttatctggccaaaaa
gaaaatcaagcagcggcacgatttgttggtgtgccaaataaagaaaaaattgcagaagtg
aaagattactttaaagataagtatggaacagaaccgaatgtcagcacggtgtctcctact
gtaggaaaagaacttgcacgtaatgctatatatgccatcatcattgcttcgattgggatc
attatttatgtttccattcgttttgaatataaaatggccattgcagcgattgcctccctt
ttgtatgatgcattcttcattgtggcattctttagtatcacacgattagaggtagatgtg
accttcattgcggcgatcctcacggtgatcgggtattcgatcaatgacacgatcgtgacg
ttcgatagggttcgtgagcaaatgaagaaacgtaaaccaaaaacggtagaagatctatct
tacatcgttaacttgagtttacagcaaacctttacacgatctatcaatacggtactcact
gtcgtaattgttgtgatcgcactgcttatcttcggatcggcatcgattacaaacttctcc
ctcgccttacttgtcggtctgttaacaggggtgtactcatctctatatatcgcagcgcaa
atttggctcatgtggaaaggccgtgagctgaaaaagccggcgaagattgatactgagcaa
gatatttaa
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