Bacillus pumilus SH-B9: UP12_12890
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Entry
UP12_12890 CDS
T04776
Name
(GenBank) recombination and DNA strand exchange inhibitor protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
bpus
Bacillus pumilus SH-B9
Pathway
bpus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UP12_12890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpus03400
]
UP12_12890
DNA repair and recombination proteins [BR:
bpus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
UP12_12890
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
DUF8841
AAA_21
FimW_N
AAA_22
Perilipin
Motif
Other DBs
NCBI-ProteinID:
AMM99477
LinkDB
All DBs
Position
complement(2572423..2574780)
Genome browser
AA seq
785 aa
AA seq
DB search
MQQKVLASLEFHKVKEKVMSYTASTLGKERAQDLTPLTDIETIQHLLEEVAEAQDVIRLK
GSAPFGGLTDIRRAVKRAEIGSTLSPSELMEIAGLLYAVKNMKHFLTSMYDDGVDIPRLH
TYAETLILLPEIRKEIESCIGDNGEVLDHATPALRSLRIQLRSLESKVRDKLEAMIRSQS
ASKMLSDTIVTIRNDRFVIPVKQEYRSNYGGIVHDQSSSGATLFIEPQVVVDVNNTLQQT
RLKEKQEVEKILQMLTESVSEHIGELLHNVKELQTLDFIFAKAKYAKAEKATKPAVNDQG
EIYLKRARHPLLPRDQVVANDIELGKDFSTIVITGPNTGGKTVTLKTLGLLTLMTQAGLH
IPVEEGSEVAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILKHLTSNSLVLFDELGAG
TDPAEGAALAMSILDEVHQTNARVIATTHYPELKAYGYNREGVTNASVEFDIETLSPTYR
LLIGVPGRSNAFEISKRLGLPDHLIDRAKADMHAEHNEVDQMIASLEDSKKQAEEELHET
EVYRKEAEKLHKELQRQILEWNEQKDKLLEEVEQKAKEKIDQASKEAEDIIQELRSIKSE
HRSFKEHELIDARKRLEEAVPEFDRKKKPEPAKKAVRQLKSGDEVKVLTFGQKGTLLEQT
GDKEWSVQMGILKMKVKEKDMEFIKSAPEFKQEKAITAVKGKDYHVSLELDLRGERYENA
LSRVEKYLDDAVLAGYPRVSIIHGKGTGALRKGVQELLKQHRSVKNARFGEQGEGGSGVT
IVELK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
ctgcaacaaaaagtgttagcatcattagaatttcataaagtaaaagaaaaagtgatgtcc
tataccgcatccacattaggaaaagaaagagcgcaggatttaacacctctgacggatata
gaaaccattcagcatttgctggaagaggtagcagaagcgcaagatgtgatccgattaaag
ggatcagcgccatttggcgggttaacagatattagacgcgcagtgaaacgggcagaaatc
ggaagtacattaagcccttctgagctgatggaaatcgcaggactattatatgcggtgaaa
aatatgaagcactttctcacgtccatgtatgatgatggagtagacataccgcgccttcat
acatatgctgagacgctcatattactgcctgaaatcagaaaagaaatcgaaagctgtatt
ggtgataatggagaagtgcttgatcatgcaaccccagcacttcgttcattgcgcattcaa
ttacgctcactagaatcaaaggtccgtgataaattagaagcgatgattcgttcacaatcg
gcttcgaaaatgctgtcagacacaattgtcaccattcgtaatgaccggtttgttattcct
gtgaaacaagagtaccgctctaattacggcggcattgttcatgaccagtcttcatcaggg
gcaaccctttttattgagccgcaagtggtcgtggatgtaaataataccttgcagcaaacc
cgtttaaaagagaagcaagaggttgaaaagatcctgcaaatgctgacagagagtgtgtca
gagcacattggggaactgcttcacaatgtaaaggagctgcaaacgctagattttattttt
gctaaagctaaatatgcaaaggcagaaaaagccacaaaacctgctgtgaatgatcaagga
gaaatctatttaaaacgagcaagacatcctctattgcctcgggatcaagttgtcgcaaat
gatattgagctcggtaaagatttttcaacaatcgtgatcactggaccaaatacaggggga
aagaccgttaccttaaaaacgctgggtctattgacgctgatgacacaggcgggcctccat
attccagttgaagaaggctctgaagtggctgtgttcgaccaagtttttgctgatattgga
gacgaacaatccatcgaacaaagcttgagtacgttctcatctcatatggtcaatattgtc
gatatcttaaagcatttgacttctaactctctcgttttatttgatgaattaggggcagga
acagacccagctgaaggtgcggcacttgcgatgagcatattagatgaagtgcatcaaaca
aatgcacgtgtcattgcaacgactcattaccccgagctgaaggcatatgggtataaccgg
gaaggcgtcacgaatgcaagcgtggagtttgatatcgaaaccttatcaccaacgtaccgc
ctgctcatcggtgtgcctggtcgaagtaacgcatttgaaatttcaaagcgtcttggtttg
ccagatcacctcatagaccgggcaaaagcggatatgcatgcagagcataatgaagtagac
caaatgattgcttcattagaagatagcaagaaacaagcagaagaagaactgcatgagaca
gaagtctatagaaaagaagcagaaaagcttcataaagaattgcaaagacaaattcttgaa
tggaatgagcaaaaagacaaactgcttgaagaagttgaacagaaagcgaaagagaaaatt
gatcaagcatcaaaagaagcagaagatatcattcaagagctccgttcgataaaaagtgaa
caccgctcattcaaagagcatgaactcatcgatgcgcgaaagcgtcttgaagaagctgtt
cctgagtttgacaggaagaagaagccagagccagcgaaaaaagcagtaagacagctgaag
tcaggcgacgaagtcaaagtgcttaccttcggacaaaaaggaacactgcttgaacaaaca
ggcgacaaagaatggagtgtccaaatgggcattctaaaaatgaaggtaaaagaaaaagac
atggaatttatcaaatcagcacctgaatttaagcaagaaaaagccatcacggcagtcaaa
gggaaagattatcatgtctcgcttgaactcgatttaagaggcgagcgttatgaaaatgcc
ttaagcagagtcgaaaaatatttagatgatgctgtattagctggttatcctcgcgtgtct
attattcacggtaaaggaactggtgcccttagaaaaggggttcaggaattattgaaacag
caccgaagtgtgaaaaatgctcgttttggcgaacaaggtgagggaggatcaggcgtcacc
atcgtcgaattaaagtaa
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