Bacillus pumilus SH-B9: UP12_13550
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Entry
UP12_13550 CDS
T04776
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
bpus
Bacillus pumilus SH-B9
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpus03009
]
UP12_13550
Enzymes [BR:
bpus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
UP12_13550
Ribosome biogenesis [BR:
bpus03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
UP12_13550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AMM98323
LinkDB
All DBs
Position
complement(2710032..2710748)
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AA seq
238 aa
AA seq
DB search
MRLDKLLASSGFGSRKDVKKLVKARAVTVNGELAKQVKDHVDPSNDEVLVHGERVEYKEF
IYLMMNKPDGVISATEDLRDETVVDLLEPEDIAREPFPVGRLDKDTVGLLLLTNDGQLAH
QLLSPKKHVPKMYEVHLKYPLGDQDIKRLEEGVVILDDYRTKPAKVEVDANESEDTRIRL
TITEGKYHQVKLMAQAVGNEVIFLKRRSMGAVSLDEDLAPGEYRELTDEELDSLINRP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttgataaattgcttgctagcagcggctttggttcaagaaaagatgtaaagaag
ctggtcaaggcacgggcagtcaccgtgaatggagaactggcgaagcaggtgaaagatcat
gttgatccatcgaatgatgaagtgctcgtacatggagagcgtgtagagtataaagaattc
atttacttaatgatgaacaaaccagatggggtcatctcagcaacagaagatctgcgggat
gaaacggttgtcgatttacttgagccggaggatatcgcaagggagccatttcctgtgggc
agactggataaggatacagtcggtcttctcctcctcacaaatgatggacagcttgcacat
caattactttctccaaaaaagcatgtgccaaaaatgtacgaggttcatttgaaatatcca
ttaggagatcaagacatcaagcgtcttgaagagggtgttgtgattttagatgattaccgg
acgaagccggcgaaggttgaagtagatgcgaatgaaagtgaagatacacgcatccgttta
acaattactgaaggaaagtaccatcaagtgaagctgatggcgcaagcagtgggaaatgaa
gtcatctttttaaaaagacgctcgatgggggctgtctcattagatgaagatctagcgcct
ggggagtaccgtgaattgacggatgaagaattagacagcttaatcaatcgaccatag
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