Bacillus pumilus SH-B9: UP12_17225
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Entry
UP12_17225 CDS
T04776
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpus
Bacillus pumilus SH-B9
Pathway
bpus00260
Glycine, serine and threonine metabolism
bpus00460
Cyanoamino acid metabolism
bpus00630
Glyoxylate and dicarboxylate metabolism
bpus00670
One carbon pool by folate
bpus00680
Methane metabolism
bpus01100
Metabolic pathways
bpus01110
Biosynthesis of secondary metabolites
bpus01120
Microbial metabolism in diverse environments
bpus01200
Carbon metabolism
bpus01230
Biosynthesis of amino acids
bpus01240
Biosynthesis of cofactors
bpus04981
Folate transport and metabolism
Module
bpus_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
UP12_17225
09102 Energy metabolism
00680 Methane metabolism
UP12_17225
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
UP12_17225
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
UP12_17225
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
UP12_17225
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
UP12_17225
Enzymes [BR:
bpus01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
UP12_17225
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AMM98986
LinkDB
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Position
complement(3395549..3396796)
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AA seq
415 aa
AA seq
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MKHLPEQDAQVFKAIQLERKRQQDKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRY
YGGCEHVDVVEDIARDRAKEIFGAEYVNVQPHSGAQANMAVYFTILEHGDTVLGMNLSHG
GHLTHGSPVNFSGVQYNFVEYGVDKETQHIDYQDVLEKAREHKPKLIVAGASAYPRQIDF
KKFREIADEVGAYFMVDMAHIAGLVAVGLHPNPVPYADFVTTTTHKTLRGPRGGMILCRE
EFGKKIDKSIFPGIQGGPLMHVISAKAVSFGEVLNGDFKTYAQNVIDNAKQLAETLLSED
IQLVSGGTDNHLVLIDLRSLGITGKIAENVLDEIGITVNKNAIPYDPEKPFVTSGVRVGT
AAVTSRGFDQEAMKEVGSIIALALKHHEDEAKLEEAKKRVSDLTARFPLYNELDY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatttacctgagcaagacgcacaagtattcaaggcaattcaactagagcggaaa
cgccagcaggacaaaattgaattaattgcatcagaaaactttgtaagcgaagcagtcatg
gaagcacaaggctctgtattaacaaacaaatatgcagaaggttaccctggtaaacgctac
tatggcggctgtgaacatgtagacgttgtagaagatatcgcacgtgaccgcgcaaaagaa
atttttggtgctgagtatgtgaacgtacagcctcactcaggtgctcaagcgaatatggcc
gtatactttaccattcttgagcatggcgatacagtgctaggtatgaacttgtcacatggc
gggcatttaacacacggaagccctgttaactttagtggtgtacagtacaactttgtagaa
tatggtgttgataaagaaacgcagcatatcgactatcaagatgtacttgaaaaagcacgt
gaacataagccgaagctaattgttgcgggtgcaagtgcatacccacgtcaaattgatttc
aaaaagttccgtgagattgcggatgaagtcggtgcttactttatggtcgacatggctcac
attgcaggtcttgttgcagtaggtcttcatccaaatccagttccttatgcagattttgtg
acaacgacgactcataaaacattgcgtggacctcgcggcggaatgattctatgccgtgaa
gagtttgggaaaaagatcgacaaatcgatcttccctggtattcaaggtggaccgctgatg
catgtcatctctgcaaaagctgtttctttcggtgaagtattgaacggagattttaaaaca
tatgcacaaaacgtcattgacaatgcaaagcagctagctgaaacccttttatctgaagat
attcagcttgtgtctggtggaacggataaccatcttgttcttatcgacttacgttctctt
ggcatcacagggaaaattgcagaaaatgttcttgatgaaattggtattacagtgaacaaa
aatgcgattccttatgatccagaaaaaccttttgtcacaagtggtgtacgtgttggtaca
gcagcagtgacaagccgcggtttcgatcaagaagcaatgaaagaagtcggttccattatt
gcgcttgctctcaaacatcatgaagatgaagcgaaattagaagaagcgaaaaagcgtgta
tctgatctaactgcccgcttccctctatataacgaattagattattaa
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