Bacillus pumilus SH-B9: UP12_17465
Help
Entry
UP12_17465 CDS
T04776
Name
(GenBank) penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
bpus
Bacillus pumilus SH-B9
Pathway
bpus00550
Peptidoglycan biosynthesis
bpus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
UP12_17465
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bpus01003
]
UP12_17465
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpus01011
]
UP12_17465
Enzymes [BR:
bpus01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
UP12_17465
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
UP12_17465
Glycosyltransferases [BR:
bpus01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
UP12_17465
Peptidoglycan biosynthesis and degradation proteins [BR:
bpus01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
UP12_17465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
AMM99032
LinkDB
All DBs
Position
3443917..3445986
Genome browser
AA seq
689 aa
AA seq
DB search
MDTIMSNKKIRMTVKTIRACFFIGLLAFLFAGTVFLTILLIAKWQGAPSVQVPQSTTIYA
ADGSKLGESSFGEKRYWVPLKDMSPHIRQAAVAVEDKTFYEHHGFDVKRMAGAAVADIRA
MAKVQGASTITQQYARNLYLDHDKTWKRKWNEAFYTIRLEQNYTKDEILEGYLNTIYYGH
GAYGVEAASRLYFGKKAKNLTLAESALLAGIPKGPSLYSPYVNEEKAGARKNMILRHMQE
DGMITKKAAAEAAKEKLSYRPLQKKQLQAKQAPYFYDDVIRELKQSLGLTEEQIETYGLH
IQTTLNPELQKMAEKTLQNTIYSKSDIQIGFTAIHPQTGHVLALIGGRDYEKSPFNRVTQ
AKRQPGSTMKPLLYYIALQNGFTPATVMRSEETVFELDDQGSGAAYSPSNYHGYYANDGI
TMLQALALSDNIYAVKTHLFLGMEQLVRAGKTFGINERLDQVPSLALGTSPVKPIEMTNA
YAMLVNGGKRVKPTFITKVTDAKGNVLFEEKQKREQVLDEKAAFVTTDMMSGMFNDQLNG
YTSVTGRTIMKDLTRTYGGKSGTTGADSWMIGFSPQLVTGVWTGYDKGRTIDSVEETAYA
KKIWASFMESALSKQPASSFMPPDGVKGVYINPKTGDLAGPGCESKVFTYFIEGTEPTGV
CYGAEDKSSEEDPVQDQRPKKWWEKWLKR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacacaatcatgagtaataaaaaaatccgcatgaccgtgaaaacgattcgagcctgt
ttttttattggcttgctcgcttttctatttgcaggcactgtctttttgacgattctttta
atagccaaatggcaaggtgccccctctgttcaagttccccaatctacgacgatttatgca
gccgatggttcaaagcttggagaatccagctttggagaaaagagatattgggtgccctta
aaggacatgtcccctcatatcagacaggcagctgtagctgttgaggataaaaccttttat
gagcatcatggctttgatgtgaaacggatggcgggtgctgcagtggcggatattcgtgct
atggctaaggtacaaggcgccagcacgatcacccagcaatatgcacgaaatctgtattta
gatcatgataaaacgtggaagcggaagtggaatgaagccttttacacgatccgcttagag
caaaactatacaaaagacgagattttagaaggatacttgaacaccatttattatggtcac
ggagcttacggcgtggaagcggcgtcccgtctgtatttcggaaaaaaagcgaagaatttg
acactcgctgaatctgccttacttgccggtatcccaaagggcccttctctctactcccct
tatgtgaatgaagagaaagccggcgcaagaaagaatatgattttgaggcacatgcaagag
gatggcatgattacgaaaaaggcagccgctgaagccgcgaaagaaaaactgtcctatcgc
cctttgcagaagaagcagctgcaagcaaagcaagccccatatttttatgatgatgtgatt
cgtgagttgaaacaaagcttggggttaactgaggaacagatcgaaacttatggtcttcat
atccaaacgactttaaatccagagttacagaaaatggctgagaaaacgttacaaaacaca
atctattcgaaatcagacatccaaatcggctttactgctatccatccccaaacaggtcat
gtactcgccctcatcggaggaagagattatgagaaaagtccattcaaccgggtcacacaa
gcgaaaagacagcccggttcaacaatgaagcctcttctctattacattgccttgcaaaat
gggtttacaccagcaaccgtcatgcgaagtgaagaaacggtttttgagctcgatgatcaa
ggaagcggtgctgcttattcaccaagcaattatcatggctattacgccaatgacggcatt
accatgcttcaagccttggcgctgtctgataatatttatgctgtgaaaacccatcttttt
ttaggaatggagcagctcgtacgtgccggcaaaacattcggcatcaacgaaagactagat
caagtgccgtcacttgccctaggcacgtcccctgtcaaaccaattgaaatgaccaatgct
tacgcaatgcttgtcaatggcggaaaacgagtcaaacccacctttattacaaaagtaacg
gatgcaaaaggtaacgtgctttttgaagaaaaacaaaaacgagagcaagtcttagatgaa
aaggcagcctttgtcaccaccgacatgatgtcaggaatgttcaatgatcagttaaacggc
tatacgagtgttactggccgcaccattatgaaggatctcacgcgaacatacggagggaaa
tcaggaacgacaggagccgacagctggatgatcggcttctctcctcaactcgtcacaggt
gtgtggacgggctatgataaagggcgtaccattgactcggtcgaagaaacagcctatgca
aaaaagatatgggcatcctttatggaatcagccctctccaaacagccagcgtcctccttc
atgccgccagacggtgtaaaaggtgtgtatatcaatccaaaaaccggcgatctcgcgggt
ccaggatgtgaatcaaaggtattcacctattttatagaaggaacggagccgacaggtgtg
tgctacggtgctgaggataaatcttctgaggaagatccggttcaagatcaaaggccaaag
aaatggtgggaaaagtggctgaaacgttaa
DBGET
integrated database retrieval system
