Brachyspira pilosicoli WesB: WESB_1704
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Entry
WESB_1704 CDS
T02412
Symbol
ygcA
Name
(GenBank) TrmA-family RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bpw
Brachyspira pilosicoli WesB
Brite
KEGG Orthology (KO) [BR:
bpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpw03009
]
WESB_1704 (ygcA)
Enzymes [BR:
bpw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
WESB_1704 (ygcA)
Ribosome biogenesis [BR:
bpw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
WESB_1704 (ygcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
DUF6981
BOF
Motif
Other DBs
NCBI-ProteinID:
CCG57169
UniProt:
K0JJQ6
LinkDB
All DBs
Position
complement(1891177..1892349)
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AA seq
390 aa
AA seq
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MKVEIIDTAYGGYGVAKEGKIIFVAHSVEGDVVDISVKKENKNFCYANINSIIQPSKHRI
KAKCKYAGICGGCVFNHIEYNKQLEIKKSIVLNSIRNIEYKNKINIIKSPNEHYRLRVNM
IAQNGNIGFYKFNTNEFVNIDECIILKEKLFCKIKNFVNRSNITGNIYAIESNNDKTLSF
ADIIKQNKNIDTSYFDGITIKQKNKIKIYGIDKTNYNTYFGEVPLSHKSFFQSNHYLLDE
FQKSTVKYFNEYDKNIVELYAGSGFFSVAIKEKLKSLNIDYKLISSEISSDAVNIAKDII
KEDASETLKKINYNVDSLFVDPPREGLDKKVIENIIRIKPKKIIYISCNPMTFARDINLL
KDYYELIDLNIIDMFPDTYHIELISCLEIK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagaaataatagatacagcttatggcggatatggcgttgctaaagaaggaaaa
attatatttgtagcacattctgttgaaggcgatgtagttgatatatccgtaaaaaaagaa
aataaaaacttttgctatgctaatataaatagcatcatacagccttcaaagcatagaata
aaagcaaaatgtaaatatgcaggtatttgcggcgggtgtgtatttaaccatattgaatat
aataagcaattagaaataaaaaaaagtatagtattaaactctataagaaatattgaatat
aagaataaaataaacatcataaaatcacctaatgaacattatagacttagagtaaatatg
atagctcaaaacggaaatattggcttttataagtttaatactaatgagtttgtgaatata
gatgaatgtataatattaaaagagaaactattttgtaaaataaaaaactttgttaatcgt
agtaatataactggaaatatttatgcgatagaaagtaataatgacaaaacgctatcattt
gctgatattataaaacaaaataaaaatatagatacaagctattttgatggaataactata
aaacaaaaaaataaaataaaaatatacggcatagataaaacaaattacaacacatatttt
ggagaagtgccattatcacataaaagcttttttcaatcaaatcattatctgttagatgag
tttcaaaagagtactgttaaatattttaatgaatatgataagaatatagttgagctttat
gccggaagcggatttttttctgttgctattaaagaaaaattaaaaagtttaaatattgat
tataaattaatatcttctgagataagttctgatgctgtaaatattgcaaaagatattata
aaagaagatgcaagcgaaacattaaaaaaaataaattataatgtagattcattatttgtt
gatcctcctcgtgaaggattagataaaaaagtaatagaaaacattattagaataaaacca
aaaaaaattatatatatttcttgtaaccctatgacatttgcaagagatattaatttactg
aaagactattatgagttaatagatttaaatataatagatatgtttccagacacttatcat
atagaactaatttcttgtttagagataaaataa
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