Paraburkholderia phenoliruptrix: BUPH_00294
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Entry
BUPH_00294 CDS
T02300
Name
(GenBank) helicase C2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BUPH_00294
09124 Replication and repair
03420 Nucleotide excision repair
BUPH_00294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpx03021
]
BUPH_00294
03036 Chromosome and associated proteins [BR:
bpx03036
]
BUPH_00294
03400 DNA repair and recombination proteins [BR:
bpx03400
]
BUPH_00294
Enzymes [BR:
bpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BUPH_00294
Transcription machinery [BR:
bpx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BUPH_00294
Chromosome and associated proteins [BR:
bpx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BUPH_00294
DNA repair and recombination proteins [BR:
bpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BUPH_00294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFT87764
UniProt:
K0DWU8
LinkDB
All DBs
Position
2:complement(143658..145922)
Genome browser
AA seq
754 aa
AA seq
DB search
MTYVVAVRAMCEFTARRGDLDLRFTPAPTSLEGMAGHVTVAGRRASGYESEITLTATHRN
LTVRGRADGYDPAQNRLEEIKTHRGDLERMPANHRALHWAQARVYGHLLCRARGLGGLTV
ALVYFDVGSQKETLLTQTHSARELEIFFVEQCERFLDWAVQEEAHRAARNAALSALQFPH
AQFRSGQRELAVSVYRAARDGKPLMAQAPTGIGKTLATIFPLLKACAAEHIDRVFFLTAK
TPGRALALDAIETLRRSAAPLPLRTLELVARDKACEHPDKACNGESCPLARGFYDRLDAA
RSAALAGARLDRAAVREAALAHDVCPYYLAQELARWADVVVGDYNYYYDSSAMLYALTQI
NAWRVGVLVDEAHNLLDRARRMYTASLDQAALRLARKTAPPTLRKPLERLQREWSAVKRA
QAASYQVYAEVPGKLLSAAQNLIGAVTDQLAEAPLSIDETGLRFFFDAMHFVALAEQFGE
HSIVDITLTTERHAPRDKTSCVICVRNVIPAPFLASRYAAARTTVMFSGTLTPHHFYRDT
LGLAKDTPWLDVEGPFRAEQLQVKVAGNVSTRWRDRERSLEPIVDLIARQYAVKPGNYLG
FVSSFEYLQQIVALMRERHPGVPVWAQEPGMDEAARDAFLARFRTTSQGVGFAVLGGAFS
EGVDLVGQQLIGAFIATLGLPQMNEVNEEMRRTMEARFGSGYEYMYLYPGLQKVVQAAGR
VIRTEHDEGVVHLIDDRYRRPEVRRLLPRWWQVQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacctacgtcgtcgccgtacgagcgatgtgcgagttcaccgcaagacgcggcgacctc
gatctgcggtttacgccggcgcccacttcgctggaaggcatggcgggccatgtgaccgtc
gccgggcgccgtgcgagcggctacgaaagcgaaatcacgctgacggctacgcatcgcaac
ctgacggttcggggccgcgctgacggctacgaccctgcgcagaaccgcctcgaagagatc
aagacccatcgcggcgatctggagcgcatgcccgcgaatcaccgcgcgctgcactgggcg
caggcacgggtgtacggacatttgctgtgccgcgcgcgtgggctgggcggcttgacggtc
gcgctggtttatttcgatgtgggcagtcagaaagaaacgttgctcacgcaaacgcatagc
gcgcgcgagcttgaaattttcttcgtcgaacagtgcgaacggtttctcgactgggccgtg
caggaagaagcgcatcgtgccgcgcgcaatgcggcgctgagtgcactgcagttcccgcat
gcgcagtttcgtagtgggcagcgggagctcgcggtgtccgtgtatcgcgccgcgcgcgac
ggcaaaccgctgatggcgcaggcgcccaccggcatcggcaagacgctcgccacgatcttt
ccgttgctgaaggcgtgcgcggcagagcacatcgaccgcgtgttttttctcactgcgaaa
acgccgggccgcgcgctggcgctcgacgccatagaaacgctgcgtcggagcgcggcgccg
ttgccgttgagaacgcttgaactcgtagcgcgcgacaaagcctgcgaacatcccgacaaa
gcctgcaacggcgagtcgtgtccgcttgcgcgcggcttttatgaccggctcgacgcggcg
cgcagcgcggcgctcgcgggcgcgcgtctcgatcgtgcggcagtgcgcgaagcagcgctc
gcccatgacgtgtgtccctattacctcgcgcaggaactcgcgcgctgggccgacgtcgtg
gtgggcgactacaactactactacgacagcagtgcgatgctgtacgcgctcacgcagatc
aacgcgtggcgcgtgggcgtgctggtcgatgaggcgcacaatctgctcgaccgcgcgcgc
cgcatgtatacggcgtcgctcgatcaggccgcgttgcggctcgcgcgcaagaccgcgccg
ccaacgttgcgaaagccgcttgagcgtttgcagcgcgaatggagtgcggtcaagcgcgcg
caagccgcttcgtatcaggtatacgccgaggtgccgggcaagctgctgtccgccgcgcag
aatctgatcggcgcggtcacggatcagcttgccgaagcgccgctttccatcgacgagaca
gggctgcgattctttttcgacgccatgcattttgtcgcgctcgccgagcagttcggcgag
cattcgattgtcgacatcacgctcacgacagaacgtcacgcgccgcgcgacaaaaccagt
tgcgtgatctgcgtacgcaatgtgattcccgcgccgtttctcgcgtcacgttatgcggcg
gcgcgcacgacggtgatgttctccggcacgctcacgccgcatcatttctaccgcgatacg
ctcggcctcgccaaagacacaccatggctcgatgttgaaggtccgtttcgcgcagaacag
ttgcaggtgaaggtggcgggcaacgtgtcgacgcgctggcgcgatcgcgagcgttcgctc
gagcccatcgtcgatctgattgcgaggcagtatgcggtgaagcccggcaattacctgggt
ttcgtgagcagtttcgagtacttgcagcagatcgtcgcgctgatgcgcgagcggcatccc
ggcgtgcccgtctgggcgcaggagccgggcatggacgaagcggcccgcgacgcttttctt
gcacgctttcgcacaacgagtcagggcgtcggctttgccgtgctgggcggcgcgttttcc
gaaggcgtcgatctcgtcgggcagcagttgatcggcgcctttatcgcgacgctcggcttg
ccgcaaatgaacgaagtgaacgaagagatgcgccgcacgatggaggcgcgtttcggcagt
ggctatgaatacatgtacctgtaccccggtttgcagaaggtggtgcaggcggcggggcgc
gtgatccgcacggagcacgacgagggcgtcgtgcatctgatcgacgaccgttacaggcgg
cccgaggtgcgccgcctgttgccccgctggtggcaggttcagtag
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