KEGG   Paraburkholderia phenoliruptrix: BUPH_00319
Entry
BUPH_00319        CDS       T02300                                 
Name
(GenBank) ATP-dependent helicase Lhr and Lhr-like helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bpx  Paraburkholderia phenoliruptrix
Brite
KEGG Orthology (KO) [BR:bpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpx03400]
    BUPH_00319
Enzymes [BR:bpx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BUPH_00319
    5.6.2.6  RNA 3'-5' helicase
     BUPH_00319
DNA repair and recombination proteins [BR:bpx03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BUPH_00319
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr Cas3-like_C_2 ResIII TrmB GntR MarR_2 HTH_IclR HTH_24 AAA_22
Other DBs
NCBI-ProteinID: AFT87789
UniProt: K0DWW7
LinkDB
Position
2:167463..172040
AA seq 1525 aa
MNSATNTTTTTAATAATAATAATADPPRELAAAPSPDRSPAHDALAGFHPAVAGWFLKTF
PAPTDAQAAAWPPIRQGRSTLVAAPTGSGKTLTAFLSALDDLVQQGLAGNGALPDETLVV
YVSPLKALSNDIRLNLQMPLQGIAAELHARGLPPLDIRTAVRTGDTTQQERNALKKRAPH
ILVTTPESLYVLLGSDSGRRMLSTVRTVIVDEIHALAGSKRGSHLALSLERLDALCGRRL
PRIGLSATQKPVSAVARFLVGGASLDSEMPADCAIVDVGHIRERDLALEIPPVPLEAVMP
NEVWERVYDRLAELVALHRTTLIFVNTRRMAERAARHLTERLGKDAVAAHHGSLAKEHRF
DAEQRLKRGDLRVLIATASLELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSGHHVGGMPK
GRLFPTSRDDLIECAALLDCVRRGELDALRIPRAPLDVLAQQIVAEVASAEWSEDALFEL
MRRAAPYADLTREQYDAVLRMLAEGYTSRHGPRAAYIHRDVVSGTVRGRRGGKLVAVTSG
GTIPENADYAVVLEPQAIHIGTVNEDFAVESLAGDVFQLGNASYRILRIESGRVRVEDAQ
GQPPNIPFWLGEAPGRSDELSFGVARLREQIGRLLAAEPADARHAVAATAEAAGESADAS
NPMPARLERAIDWLVAELRLDEPAARQIVDYLARARAALGVLPTQDTLVMERFFDESGGT
QLVIHAPFGSRVNRAWGLALRKRFCRQFNFELQAAATEDAIVLSLTGSHSFVLDEVWRYL
HSNSAEHLLIQALLDAPLFGVRWRWNATTALGLPRYTGGRKTAPQLQRMRSEDLLTSVFP
EQAACLENVVGERELPRHPLVDQTVDDCLHDAMDSERWIALLQRIESGDVRLVARDLPAP
SPLAAEILNAKPYAYLDDAPIEERRTQAVLNRRWTDPSSADDLGALDADAIASVREEAWP
QAQSVDEMHEALMGLACITEAEARGNDGWPEWLEALAQAGRATRLPIAADAALWLPAERL
TCFAALYPDTNGPRFAPPLSAPKGFTDAWSADDALLDVLRARLTGFGPLPASAIADALRL
PETSVEQALGRLEAEGYVMRGRFTRQAAADEWCERHLLARIHRYTVKRLRREIEPVERHD
FMRFLFEWQHLTPDTRSEGRDALAAVLDQLEGFEAAAGAWEEDILPARVKAYANTSLDEL
CRAGKIVWTRLTERSRSAAGPVRSTPIVLLPRAQVRAWSALIDPARQPALSARAQAVHDL
LSAHGAMFFDELLHELRVLRIELESALGELVAAGLVNSDSFAGLRALLKPAAKRNAYPGS
RRARPTALIGGMDDAGRWALVNRRTSPPAGASVVDAKADAPPQSSLQRRSLPPEILEHVA
MTLLRRYGVIFWRLLAREADWLPPWRDLLRVYQRLEARGLIRGGRFVNGLAGEQFALPEA
IPLLREVRRHANDGAFVCVGGTDPLNLAGTLLVGERVPAVAGNRILFRDGIVVATLVAGA
FWFEASVEANPAEREQARSWLTRRF
NT seq 4578 nt   +upstreamnt  +downstreamnt
atgaattcagccaccaacacgacgaccacgacggccgcgacggccgcgacggccgcgacg
gccgccaccgccgacccgccgcgcgagctcgcggccgcgccctcccctgatcgcagccca
gcgcatgacgccctggccggctttcatcccgccgtggccggctggttcctgaagactttc
cccgcgccgaccgacgcacaggccgccgcgtggccgcccatccgccaaggccgctccacg
ctcgtcgccgcgccgacgggttccggcaaaacgctcaccgcgttcctgtccgccctcgac
gatctggtccagcaaggcctcgcgggcaacggcgcgctgcccgacgaaacgctcgtggtc
tacgtgtcgccgctcaaggcgctctccaacgacattcgtctcaatctgcagatgccgctg
caaggcatcgccgcggaactccacgcgcgcgggctgccgccgctcgacatccgcaccgcc
gtgcgcaccggcgacacgacgcagcaggagcgcaacgcgctcaaaaagcgcgcgccgcac
attctcgtcaccacgccagaatcgctctatgtgctgctcggctcggattcgggccgccgc
atgctgtcgacggtgcgcacggtgatcgtcgacgaaattcatgcgctggccggcagcaag
cgcggcagccatctcgcgcttagcctcgaacggctcgatgcgctgtgcggacggcgtctg
ccgcgcatcggcctctccgcgacgcaaaagccggtgagcgcggttgcacgatttctcgta
ggaggcgcgagtctcgacagcgagatgccggccgattgcgcgatcgtcgatgtcggccat
atccgcgagcgcgatctggcgctggagattccgcccgtgccgctcgaagccgtcatgccg
aacgaagtgtgggagcgcgtctacgaccgcctcgcggaactcgtcgcgctgcatcgcacg
acgctgatcttcgtcaacacgcgccgcatggccgagcgcgcggcgcgtcacctcaccgag
cggctcggcaaggacgccgtcgccgcgcaccacggcagcctcgccaaagagcatcgtttc
gacgccgaacagcggctcaagcgcggcgacttgcgcgtgctgatcgccacggcttcgctg
gaactcggcatcgatatcggcgacgtcgacctggtctgtcaaatgggttcgccgcgcgcg
attgcgccgttcctgcaacgcgtggggcgctcgggccatcatgtgggcggcatgccgaaa
ggacggctcttcccgacttcgcgcgacgacctgatcgaatgcgcggcgttgctggattgc
gtgcggcgtggcgagctcgacgcgctgcgcattccgcgcgcgccgctcgacgtgcttgcg
cagcagatcgtcgcggaggtcgcgagcgccgaatggagcgaagacgccctgttcgaactg
atgcgccgcgccgcgccctatgcggacctcacgcgcgagcagtacgacgcggtgctgcgc
atgctcgccgaaggctacacgagccgccatgggccgcgcgccgcctatattcaccgcgac
gtggtgagcggcaccgtgcgcggccggcgcggcggcaaactcgtcgcggtcacgtcgggc
ggcacgattcccgaaaacgcggactatgcggtcgtgctggagccgcaggcgatccatatc
ggcacggtcaatgaagacttcgcggtcgaaagcctcgcgggcgacgtgttccagctcggc
aatgcgtcgtaccggattctgcggatcgaaagcggccgggtgcgcgtcgaggatgcgcaa
ggccagccgcccaacatcccgttctggctgggcgaagcgccgggccgcagcgacgagctg
tcgttcggcgtcgcgcggctgcgcgagcagattgggcgcctgctggcagcggaacccgcc
gatgcacgccacgccgtggccgccactgccgaagcggccggcgaatccgccgacgcgtcc
aaccccatgcccgcgcgtctcgaacgcgcgatcgactggctcgtcgccgaactccgcctc
gatgaacccgccgcgcgccagatcgtcgactaccttgcccgagcccgcgccgcgctaggc
gtcttgccgacgcaggacacactcgtgatggagcgtttcttcgacgaatccggcggcacg
cagctcgtgattcacgcgccgttcggcagccgcgtgaaccgcgcgtggggccttgcgctg
cgcaaacgcttttgccgccagttcaacttcgaactgcaagccgcggcgaccgaggacgcg
atcgtgctgtcgctgaccggcagccactcgttcgtgctcgacgaagtgtggcgctatctg
cattcgaacagcgccgagcatctgctgattcaggcgctgctcgacgcgccgcttttcggc
gtgcgctggcgctggaacgcgaccaccgcgctcggcctgccgcgctacaccggcggacgc
aaaaccgcgccgcaattgcagcgcatgcgcagcgaagacctgctgacgagcgtcttcccc
gagcaggccgcgtgtctggagaacgtggtgggcgagcgcgaactgccgcgtcatccgctc
gtcgaccagaccgtcgacgactgcctgcacgacgcgatggacagcgagcgctggatcgcg
ttgctacagcgcatagaaagcggcgacgtgcggctcgtcgcgcgcgatctgccggcgccc
tcgccgctcgccgccgaaatcctcaatgcgaagccctacgcgtatctcgacgacgcgccg
atcgaggaacgccgcacgcaggccgtgctgaatcgccgctggaccgatccgtcgagcgcc
gacgacctgggcgccctcgacgccgacgccattgccagcgtgcgcgaagaggcgtggccg
caagcacagagcgtcgacgaaatgcacgaggcgctcatgggcctcgcgtgcatcaccgaa
gccgaggcgcgtggcaacgacggctggccggaatggctcgaagcgctcgcgcaagcgggc
cgcgcgacacgtctgcccatcgccgccgacgccgccctgtggctgcccgccgaacggctg
acctgtttcgccgcgctttaccccgacacgaacggcccgcgcttcgcgccgccacttagc
gcaccgaagggtttcaccgacgcgtggagcgccgacgacgccctgctcgacgtgctgcgc
gcgcggctcaccggtttcggcccgctgcccgcgagcgcgattgcagacgcgctgcggctg
ccagagacctcggtcgaacaggcgctcggacgcctcgaagccgaaggctatgtgatgcgc
ggccgcttcacccgccaggcggccgccgacgaatggtgcgagcggcacctgctcgcgcgc
attcaccgctacaccgtcaagcgtttgcgccgcgagatcgagccggtggagcggcacgat
ttcatgcgctttctgttcgaatggcagcatctgacgccggatacgcgcagcgagggccgc
gacgcgctggcggccgtgctggatcagctggagggcttcgaggccgccgccggcgcctgg
gaggaagacatcctgcccgcgcgcgtaaaggcgtacgccaatacttcgctcgacgaacta
tgtcgtgcgggcaagatcgtctggacgcggctcaccgagcgctcgcgcagcgccgccggt
ccggtgcgcagcacgcctatcgtgctgctgccgcgcgcgcaggtgcgcgcctggagcgcg
ctgatcgatccggcgcgccaaccggcactgtcggcgcgggcgcaagcggttcacgacctg
ctctcggcacatggcgcgatgttcttcgacgaactgctgcacgagcttcgcgtcttgcgt
atcgagctggaaagcgcactcggcgagctggtggcggccggtctcgtcaattcggacagt
ttcgcgggtctgcgcgcgctgctgaaaccggccgcgaaacgcaatgcgtatccaggcagc
cggcgcgcgcgcccgacggctttgatcggaggaatggacgacgcgggacgctgggcgctc
gtcaaccgacgcacttcgccgcccgccggcgcgtcggttgtcgatgccaaagcggacgca
ccgccgcaatcatcgctacaacggcgttcattgccgccggaaattctcgaacatgttgcg
atgacgttgctgcggcgctacggcgtcattttctggcgtcttctcgcgcgcgaagccgac
tggctgccgccgtggcgcgacctgctgcgcgtgtatcagcggctggaggcgcgcggcctg
atccgcggcggacgtttcgtcaatggactcgccggcgagcaattcgcgttgccggaagcg
attccgttgctgcgcgaagtacgcaggcatgcgaacgatggtgcttttgtctgcgtgggc
ggcaccgatccgttgaatctcgcgggcacgctgctggtcggcgaacgcgtgccggctgtg
gcaggcaaccgcattctgtttcgcgacggcattgtggtagccacgctcgtggcaggcgct
ttctggttcgaggcgtcggtggaggcgaacccggcggaacgcgagcaggcgcgcagctgg
ctcacgcggcggttctaa

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