Paraburkholderia phenoliruptrix: BUPH_00320
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Entry
BUPH_00320 CDS
T02300
Name
(GenBank) cyclic di-GMP phosphodiesterase Gmr
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BUPH_00320
Enzymes [BR:
bpx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
BUPH_00320
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_8
Diguanyl_cycl_sensor
GGDEF_2
PAS_3
Motif
Other DBs
NCBI-ProteinID:
AFT87790
UniProt:
K0DS74
LinkDB
All DBs
Position
2:172293..174296
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AA seq
667 aa
AA seq
DB search
MNDDQHEQVLYAQFGTSSPCWRLSSDSNALELTPVTGDVPANVAIPLNPQQAAQIRCLTG
ITSHVVLDVRLFGEPLRLHLVGRKINSSNWAGTASAYDDTESVARDLMHGLSFAEQVVSE
VNSVVVIVDRHGRIQRFNRLAEELTGVKEENIIGRNVWALFMSSEDGAASSQNIAGFFNR
GVSYEVERRVKTLNGERLFLFRNKFVQSGSGIDEQYLICSGTDITEERLAQERLTQLANT
DSLTGLANRNAIQDKIRTAIEEAGPGESVGVLFLDLDNFKKVNDHYGHVFGDRLIRDVSA
AIGTCLNEGDTLARLGGDEFIVLAAKGTAHELEATAQRILERMRTPFSLGLVEVYTGCSI
GIARYPEHGDNLESLIRSADTAMYVAKDEGKRTHRVFSPEMNRKVAEYMWLDTNLRRGLE
EGQLTLHYQPKLVLSTGVVQGVEALVRWNSPERGQIMPAEFIRYAEESGLIGVLGRWVMQ
TAAKQAAKWKADGHNLRVAINVSARQLVDTAVVRHFTEALAEAHLDPCLVDVELTESCLI
EDEAAAIDLIKSFRQLGAQVHLDDFGTGYSSLSQLGRIPLDVIKLDRSFVRSINADTKAQ
ALVRSMVVVAQELGFKVVAEGIETESEEAFMKGLGVEYVQGYLYAQPMPAAEFERWLKDR
QKLRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgaccaacacgagcaggtgctttatgcgcaattcggcacaagcagcccttgc
tggcgtctgtcgagcgacagcaacgcgctcgagctgacgccagtcaccggcgacgtgccg
gccaacgtggccattccgctgaatccccagcaggctgcgcaaatccgctgcctcacgggc
attacttctcatgtggttctcgacgtgcgcctgttcggcgagccgctgcgcctgcacctc
gtcggcagaaaaatcaacagcagcaactgggcaggcaccgcctccgcttatgacgacacc
gaatccgtcgcgcgcgatctgatgcatggcctgtcgttcgccgagcaggtcgtgtcggaa
gtcaattcggttgtcgtgatcgtcgaccggcacgggcgcatccagcgctttaaccgcctt
gccgaagaactgacgggcgtgaaggaagagaacattatcgggcgcaatgtgtgggcgctt
ttcatgtcctcggaagacggcgccgcgtcgagtcagaacattgcaggcttcttcaatcgc
ggcgtgtcgtatgaggtcgagcggcgcgtgaaaacgctcaacggcgagcggctcttcctg
tttcgcaacaagttcgtgcaaagcggcagcggcatcgacgaacagtatctgatctgctcc
ggcaccgacatcaccgaggaacgcctcgcgcaggagcggctcacgcagctcgcgaacacg
gattcgctcacggggctcgccaatcgcaacgcgatccaggacaagatccgcaccgccatc
gaagaggctgggcccggcgaatcggtgggcgtgctgtttctcgatctcgacaacttcaag
aaggtcaacgatcactacggccatgtattcggcgaccgcctgatccgcgatgtatcggcg
gccatcggcacctgtctgaacgaaggcgacacgctcgcgcgccttggcggcgacgagttc
atcgtgctcgcggcaaaaggcaccgcgcacgaactcgaagcgaccgcgcagcgcatcctc
gagcgcatgcgcacgccattcagcctcggtctcgtcgaagtctatacgggctgctcgatc
ggcatcgcgcgctatccggaacacggcgacaacctggagtcgctgatccgctcggccgac
accgcaatgtacgtggccaaagacgaaggcaagcgcacgcaccgtgtgttttcgccggag
atgaaccgcaaggtcgccgaatacatgtggctcgacacgaacctgcggcgcgggctcgaa
gaaggccaactgacgttgcactaccagccgaagcttgtcctctcaacaggtgtcgtgcag
ggcgttgaagcgctcgtgcgctggaattcgccggaacgcggccaaatcatgccggccgag
ttcattcgttatgcagaggaatcggggctgatcggcgtgctcggccgctgggtgatgcaa
acggccgccaaacaggccgccaagtggaaagcggacggccacaacctgcgcgttgcgatc
aacgtgtcggcgcggcaactggtggacacggccgtggtccggcatttcaccgaggcgctt
gcggaagcgcatctggacccctgccttgtcgacgtcgagctcaccgagagctgcctgatc
gaagacgaagccgcagctatcgacctcatcaagtcgttccggcagctcggcgctcaggtg
catctggacgacttcggcaccggctattcgtcgctgtcgcaactggggcgtattccgctc
gacgtgatcaagctcgaccgcagcttcgtgcgctcgatcaacgccgataccaaggcgcaa
gcgctcgtgcgctcgatggtggtggtcgcgcaggagctcggtttcaaggttgttgccgaa
ggaatcgagaccgagtcggaagaggcattcatgaagggcctgggcgtcgaatacgtgcag
ggctacctgtacgcgcagcccatgcccgccgcggagttcgagcgctggttgaaagaccgg
caaaagctcaggctcatcgcctga
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