Paraburkholderia phenoliruptrix: BUPH_01545
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Entry
BUPH_01545 CDS
T02300
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bpx
Paraburkholderia phenoliruptrix
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpx03000
]
BUPH_01545
Transcription factors [BR:
bpx03000
]
Prokaryotic type
Helix-turn-helix
Other families
BUPH_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
PAS_4
HTH_23
HTH_30
HTH_28
HTH_29
AAA
HTH_7
AAA_5
HTH_17
HTH_Tnp_ISL3
HTH_22
AAA_16
AAA_7
Xre-like-HTH
HTH_1
AAA_2
Parvo_NS1
AAA_22
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
AFT88994
UniProt:
K0E041
LinkDB
All DBs
Position
2:complement(1599913..1601886)
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AA seq
657 aa
AA seq
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MRDDMHHAVTPLAPRDACWLTPSIQKSHERSEIFGLSESMRPDYDVLPAGELALKLEQNR
ILCAHATPVMETLHDQIVNTQSMIVLTDAEGLILHSIGDDDFLRRAEKVALRPGANWAEN
RQGTNAIGTALAERSATVVHGEQHYLAANRFLTCSSVPILDPYGDLIGVLDVTGDHRSYH
QHTMALAKMSVQMIENHLFANTFRETLQIAFHGRAEFLGTLMEGIAAFTSDGRFLSANRS
AQFQLGLPLAGLRAHTLSSLFGLTSAQLIDRLRTHRDRHLSLNLSNGAVVCANVQFRRST
LADEPARFHAPGQAAPAQRSEPSTPPANPLSRLSYLDTGDPQIASVIAKVRKVIGKNIPI
LITGETGTGKELLAQAIHNDSPRRAGPFVAVNCASIPETLIESELFGYEEGAFTGARRKG
AVGKLLQANGGTLFLDEIGDMPYPLQVRLLRVLQERLVNPLGSAKSIPVDVAIICATHRD
LREMIAQGRFREDLYYRLNGLVVKLPPLRERTDLSAVIKKMLDCASAENAGGQPLSIADD
VMALFEQCAWPGNFRQLGNLLRTASVMVDPDGEIRREHLPDDFFDDLRAVGPSSAQGMDV
LPLPTGRLHDVAASVIANAVAQHGGNVSAAARMLGISRNTIYRKLPAQGANHSEDAA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacgacatgcatcacgccgtaaccccgctcgcccctcgcgacgcttgctggctg
acgccgtccattcagaagtcgcatgaacgctcggaaatattcggcctgagcgagtccatg
cgccccgactacgacgtgctgcctgccggcgaactggcattgaaactggaacagaaccgc
attctctgcgcgcacgccacgccggtcatggaaaccctccatgatcagattgtgaacacc
cagagcatgatcgtcctgaccgacgcggaaggcctgattcttcattccatcggcgacgac
gatttcctgcggcgcgccgagaaagtcgccctgcggcccggcgcgaactgggcggaaaac
cggcaaggcaccaatgctatcggcacggcgctcgccgagcgcagcgcaaccgtcgtccac
ggcgagcagcactatctggccgcgaaccgctttctcacctgctcgagcgtgccgattctc
gatccgtacggcgatctcatcggcgtgctggacgtgacgggcgatcatcgcagctatcac
cagcacaccatggcgctcgcgaaaatgtcggtgcagatgatcgagaatcatctgtttgcg
aacacctttcgcgaaaccttgcagattgcctttcatggccgcgccgaatttctcggcacg
ttgatggaaggcatcgccgcctttacctccgacggccgcttcctgtccgccaatcgcagc
gcgcagttccagctcggcctgccgcttgcgggattgcgcgcgcatacgctgtcgtcgctg
ttcggactcacgagcgcgcagttgatcgaccgtctgcgcacgcaccgcgaccgtcatctg
tcgttgaacctgagcaacggcgcagtggtctgcgcgaatgtgcagttccgccgcagtacg
ctcgccgacgagcccgcacgctttcacgcgcccggccaggcggcgccggcgcagcgcagc
gagccatccacgccgcccgccaatccgctgtcgaggctcagctatctggacaccggcgac
ccgcagattgcgtcggtcatcgcgaaggtgcgcaaggtgatcggcaagaacatcccgatc
ctgatcaccggcgaaaccggcaccggcaaggaactgctcgcccaggccattcacaacgat
tcgccgcgccgcgcggggccgttcgtcgcggtgaactgcgcgtcgatcccggaaacgttg
atcgaatcggaactgttcggctatgaagaaggcgccttcaccggcgcgcggcgcaaaggc
gcggtcggcaaactgctgcaggccaacggcggtacgctctttctcgacgaaatcggcgac
atgccctacccgttgcaggtgcggctcctgcgcgtgctgcaggagcgtctcgtgaatccg
ctcggctcagcaaagtcgattcccgtggacgtcgcaatcatttgcgccacccatcgcgat
ctgcgcgaaatgatcgcgcaaggccgtttccgcgaggatttgtactaccggctcaatgga
ctcgtcgtcaaattgccgccgttgcgcgagcgcaccgatttgtcggcggtgatcaaaaag
atgctggattgcgcgtcggcagagaacgccggcggccagccgcttagcatcgccgacgac
gtcatggcgcttttcgagcaatgtgcgtggcccggcaacttccgccagctcggcaatcta
ctgcgcaccgcgtcggtcatggtagatccggacggcgaaattcgtcgcgagcatctgcct
gacgatttcttcgacgatctgcgcgccgtcggtccgtcgtccgcgcagggaatggacgta
ttgccgctgcccaccgggcggcttcacgacgtggccgcgagcgtaatcgcgaacgccgtc
gcgcagcacggcggcaacgtatcggccgcggcgcgcatgctcggcatttcgcgcaatacg
atttatcggaaactgcccgcgcaaggcgcgaaccacagcgaagacgcggcgtga
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