Paraburkholderia phenoliruptrix: BUPH_01666
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Entry
BUPH_01666 CDS
T02300
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BUPH_01666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpx03400
]
BUPH_01666
DNA repair and recombination proteins [BR:
bpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BUPH_01666
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BUPH_01666
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
AAA_16
Kinesin
AAA_22
DUF6827
Motif
Other DBs
NCBI-ProteinID:
AFT85242
UniProt:
K0DKF8
LinkDB
All DBs
Position
1:1284616..1286709
Genome browser
AA seq
697 aa
AA seq
DB search
MSEQHLTEAEDTLDESKFVRFEGSPFQLYQPYPPAGDQPTAIETLVEGVEDGLSFQTLLG
VTGSGKTFTMANTIARLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMIL
TLRTGDKLGQRDIIARLIAMQYNRNEADFQRGSFRVRGDTIDIFPAEHAEMAVRVELFDD
EVETLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRDTVVRAVETIKAELRERLEFFYSEGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPSDAIMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADY
EKKTSGQVAEQLVRPTGLVDPEIEVRPARTQVDDVLAEINERVAAGDRVLVTVLTKRMAE
QLTEFLADHGIKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYADKVTDSMRRAIDETERRRAKQIAFNL
EHGITPRGVVKRIRDIIDGVYNVDDARAELKEQQTRAKFEDMSEKQLAKELKRLEKQMME
HAKNLEFEKAAQTRDQLALLRQRVFGANVGDHVSGVE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaacatctgacagaagccgaagatacgctcgacgaatccaaattcgtccgc
ttcgaaggctcgccgttccagctttatcagccgtatccgcccgccggcgaccagccgacg
gcgatcgaaacgctcgtcgaaggcgtcgaggacggtctctcgttccagacgctcctcggc
gtcaccggttcgggcaagaccttcacgatggccaacactatcgcgcggctcggccgcccg
gctatcgtgtttgcgccgaacaagacgctcgcggcgcagctctactcggagttccgcgaa
ttctttccgcgcaacgcggtcgagtacttcgtttcgtactacgactactatcagccggaa
gcgtatgtgccccagcgcgaccttttcatcgagaaggactcgtcgatcaacgagcacatc
gagcagatgcgtctgtcggccaccaaaagcctgatggagcggcgcgacgtggtgatcgtc
gcgaccgtgtcggccatttacggtatcggcaatccgtccgaataccaccagatgatcctg
accctgcgcaccggcgacaagctcggccagcgggacatcatcgcgcggctgatcgcgatg
cagtacaaccgcaacgaagcggacttccagcgcggctcgttccgcgtgcgcggcgacacg
atcgacatttttcccgccgagcatgcggaaatggcggtacgcgtcgaattgttcgacgac
gaagtcgaaaccctgcaacttttcgacccgctcaccggacgcgtgcgtcagaaaattccg
cgtttcacggtctatccgtcatcgcattacgtgacgccgcgcgacaccgtcgtgcgggcg
gtcgagaccatcaaggccgagttgcgcgagcggctggagttcttctacagcgagggcaag
ctggtcgaggcgcagcggctcgagcagcgcacccgtttcgatctggagatgctgcaggaa
ctcggcttttgcaagggcattgaaaactactcgcggcacttttccggcgcggcgcccggc
gagccgccgcctacgctcgtcgactatttgccgtccgacgcgatcatgctgctcgacgag
tcgcacgtgctgatcggccagctgaacggcatgtacaacggcgaccgcgcccgcaaggaa
aatctggtcgactacggcttccgtctgccgtccgcgctggacaaccggccgctgaaattc
aacgagttcgagcggaagatgcgtcaggtcgtgttcgtgtcggccacgccggcggactac
gaaaagaagacctcggggcaggtggccgagcagctggttcgtccgacgggactcgtcgat
ccggaaatcgaggtgcgccccgcgcgcacccaggtggacgacgtgctcgccgagatcaac
gagcgcgtcgcggcaggcgaccgcgtgctggttaccgtgctgacgaagcgcatggcagag
caattgacggagtttctggccgaccacggcatcaaggtgcgctacctgcatagcgacatc
gatacggtggagcgcgtcgagatcatccgcgacctgcggctcggcacatttgacgtgctc
gtcgggatcaatctgctgcgtgaggggctggatattcccgaagtgtcgcttgtcgccatt
ctcgacgcggacaaggaaggcttcctgcgcgccgagcgctcgctgatccagaccatcggc
cgggcggcgcgtaacgtgaacggcaaggcgattctgtatgcggacaaggtgacggattcg
atgcgccgtgccatcgacgaaaccgagcggcggcgcgcgaagcagatcgccttcaacctc
gaacacggcattacgccgcgcggggtggtcaagcgcatccgcgacattatcgacggcgtg
tacaacgtcgacgacgcgcgcgccgagttgaaggaacaacaaacgcgcgcgaaattcgag
gacatgtccgaaaagcagcttgccaaggagctgaagcgtctcgaaaagcagatgatggag
cacgcgaagaacctcgaattcgagaaggccgcccagacgcgcgaccagctcgcgttgctg
cgccagcgcgtgttcggggcgaacgtcggcgatcatgtgtcgggcgttgaatag
DBGET
integrated database retrieval system
