Paraburkholderia phenoliruptrix: BUPH_02253
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Entry
BUPH_02253 CDS
T02300
Name
(GenBank) DNA end-binding protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BUPH_02253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpx03400
]
BUPH_02253
DNA repair and recombination proteins [BR:
bpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BUPH_02253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF1045
ROH1-like
DUF3284
TFIIF_alpha
Menin
Motif
Other DBs
NCBI-ProteinID:
AFT85824
UniProt:
K0DQU7
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All DBs
Position
1:complement(2024110..2025141)
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AA seq
343 aa
AA seq
DB search
MAHMIWKGAISFGLVHVPVQLYPATKSEKVGFNLLDKRTIDPVGYKQINKRTGKDVTRDN
IVRGFEYEKDKYVVLTDEEIRAANPESTQTVDILAFVDAPDISFLYLDTPYFLTPDRKGE
KVYALLREAMKSSGKVGVASVVLHNKQHLAALIPVGPVLALNTLRWADEVRDFDEFKLPA
EGAKAAGVSARELDMAQKLIDDMSDTWDPSKYHDTFRDDIMALVERKVREGKTEEIADIE
APRESRQSADILDLSELLKRSLGRGKSKPAAGSRKRATDDEAADDNADAEEDSSGSTASR
KKARTTRSTRTSRSGGSGGGSSSGSGRTASKSTTAARKRRAAA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcacacatgatctggaaaggcgcgatcagcttcggccttgtccacgtaccggtgcag
ttgtatccggccacgaagtcggaaaaggtcggcttcaatctgctagataagcgcacgatt
gatccggtcggctacaagcagatcaacaagcgcacgggcaaggacgtgacgcgcgataac
atcgtgcgcggcttcgaatacgagaaggacaaatacgtcgtcctcacggacgaggaaatc
cgcgcggccaatcccgaatcgacgcagacggtggacatcctcgcctttgtcgacgccccc
gacatctcctttctctacctcgacacgccttacttcctgacgcccgaccgcaagggcgag
aaggtgtatgcgttgttgcgcgaggcgatgaaatcgtcaggcaaggtcggcgtggccagt
gttgtgctgcataacaagcagcaccttgccgcgctgatccccgtcgggccggtgctggcg
ctcaacacgctgcgctgggcggacgaggtgcgggacttcgacgaattcaagctgcccgcc
gaaggcgccaaggccgcgggcgtcagcgcgcgcgagctggacatggcgcaaaagctgatc
gacgacatgagcgacacgtgggatccgtcgaagtatcacgacacattccgcgacgacatc
atggcactcgtcgagcgcaaggtccgcgaaggcaagacggaggaaatcgccgacatcgag
gcgccgcgcgaatcgcgtcaatcggcggatattctcgacttgtcggagctgctcaagcgc
agcctggggcgcggcaagagcaagcccgcggcgggctcgcgcaagcgcgcgacagacgac
gaagccgccgatgacaatgcggacgccgaagaagacagcagcggctccacggcgtcgcgt
aaaaaagcgcgcactacgcgctccacccgcacgtcgcgctcgggtggcagcggtggcggt
agtagcagcggcagcggccgcacggcgtcgaaatcgactacggcagcacgcaagcgccgc
gcggcggcgtga
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