Paraburkholderia phenoliruptrix: BUPH_02270
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Entry
BUPH_02270 CDS
T02300
Name
(GenBank) RNA polymerase nonessential primary-like sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
bpx
Paraburkholderia phenoliruptrix
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpx03021
]
BUPH_02270
Transcription machinery [BR:
bpx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BUPH_02270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_20
HTH_Crp_2
KORA
Motif
Other DBs
NCBI-ProteinID:
AFT85841
UniProt:
K0DII7
LinkDB
All DBs
Position
1:complement(2044404..2045480)
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AA seq
358 aa
AA seq
DB search
MPKPKRRLPQAESETISDATSASVDDSGASEAEEELVEERELDDRQGAEEGEAREGAAES
VPDADDFRALLQAELTADTIQHYLNRISVKPLLTVEEEQKYSRLAKAGEFEARQVMIERN
LRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSIERAI
MNQARTVRLPVHVIRELNQVLRAKRHLEKNSMNSGEAAERRDASIDDIAYLTGKTTDEVT
DILALNEHTASLDAPLDLDPASSLLDLLSDDQSQSPDAEVQHRELETLTRAWLARLSDKH
RHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRKDAVL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaccgaagcgccgcctgccgcaagccgaatctgaaacgatcagcgatgccacg
tccgcttcggtggacgacagcggcgcgtcggaagcggaagaggaactcgtcgaggagcgc
gaactcgacgaccgtcagggcgccgaagagggcgaggcgcgcgagggcgcggccgagtcc
gtgcccgacgcggacgacttccgcgcgctgctgcaagccgagctgacggccgacaccatt
cagcactatctgaaccgcatcagcgtgaagccgctcctcaccgtcgaggaagagcagaag
tactcgcgtctcgcgaaggcgggcgagttcgaagcgcggcaggtcatgatcgagcgcaat
ctgcggcttgtcgtcagcatcgctaagggttatctgaaccggggcgtgccgctgctcgac
ctgatcgaggaaggcaatctcggcctcatgcacgccatcgagaaattcgatcccacgcgc
ggcttccggttttctacctacgcaacctggtggatccgacagagtatcgagcgcgcgatc
atgaaccaggcgcgcaccgtgcgcctgccggtgcatgtgattcgcgagctcaatcaggtg
ctgcgcgccaagcgccatctggaaaaaaattcgatgaattcgggcgaagccgccgagcgc
cgcgacgccagtatcgacgacatcgcttatctgaccggcaagaccaccgacgaagtcacc
gacattcttgcgttgaacgagcatacggcctcgctcgacgcgccgctcgacctcgacccg
gcaagcagtctgctcgatctgttgtccgacgaccagagccagtcgccggatgcggaagtg
cagcatcgcgagctcgaaacgctcacgcgcgcgtggctcgcacgtctgtcggacaagcat
cgccatgtgatcgaacgccgcttcggtctgaatcacatcgaacccgccacgctcgaagag
ctggccgatgaaatgggcctcacgcgcgagcgggtgcgccagatccaacaggaagcgctc
gtgcggttaaagcgcttcttcgcctccaacggcgttcggaaagacgccgttctctga
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