Paraburkholderia phenoliruptrix: BUPH_02284
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Entry
BUPH_02284 CDS
T02300
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BUPH_02284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpx03021
]
BUPH_02284
03019 Messenger RNA biogenesis [BR:
bpx03019
]
BUPH_02284
Transcription machinery [BR:
bpx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BUPH_02284
Messenger RNA biogenesis [BR:
bpx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BUPH_02284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Phostensin_N
Motif
Other DBs
NCBI-ProteinID:
AFT85854
UniProt:
K0DQX0
LinkDB
All DBs
Position
1:2059701..2060969
Genome browser
AA seq
422 aa
AA seq
DB search
MHLSELKTLHVSELIEMANGLEIESANRLRKQELMFAILKKRAKTGDTIFGDGTLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKVLLLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVVLFVLLIDERPEEVTEMQRSVAGEVIASTFDEPAARHV
QVAEMVIEKAKRLVEMKNDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREELLIKPEVLQKIWVLRKFIHDMDEVESMEFLLDKIRQTKSNSEFFDMMRRGG
GS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagcttaagactctgcacgtctccgaattgatcgagatggccaatggc
ctcgagatcgaaagtgcgaaccgcctgcgcaagcaggaattgatgttcgccattctaaaa
aaacgagccaaaacgggcgacacgatcttcggcgacggcacgcttgaagtgctgccggac
ggcttcggcttcctgcgttcgccggaaacctcctacctcgccagcacggatgacatctac
atcagcccgtcgcaaatccgccgcttcaacctgcatacgggtgacacgatcgaaggcgaa
gtgcgcacgccgaaagacggcgagcgctattttgcgctggtgaaggtggacaaggtcaac
ggccagccgccggaggcctcgaagcacaagatcatgttcgaaaacctcacgccgctgcac
ccgaacaaggtgctgctgctcgaacgtgaaatgcgtggcgaagagaatgtgacgggccgc
atcatcgacatgatcgcgccgatcggcaagggtcaacgcggcctgctcgtcgcctcgccg
aagtcgggcaagacggtgatgcttcagcacatcgcgcatgccatcaagcagaatcatccc
gacgtcgtgctgttcgttctgctgatcgacgagcgcccggaagaagtgacggaaatgcag
cgctcggttgcgggcgaagtgatcgcctccacgttcgacgaacccgccgcgcgtcacgtg
caggtcgccgaaatggtgatcgaaaaagccaagcgccttgtcgaaatgaagaacgacgta
gtcattctgctcgactcgatcacgcgtctcgcgcgcgcgtacaacacggtcgtgccggct
tcgggcaaggtgctgacaggcggtgtggacgcgaacgcgctgcaacgtccgaagcgcttc
ttcggtgccgcgcgcaatatcgaggaaggcggctcgctcaccatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgtcgtctcgccgagaagcgcgtgtatccgtccatcaatctg
aacaagtcgggcacccgccgcgaagaactgctcatcaagcccgaagtgctgcaaaaaatc
tgggtgctgcgcaagttcattcacgacatggacgaagtcgagtcgatggaattcctgctc
gacaagatccgccagaccaagagcaactccgagttcttcgacatgatgcgtcgcggcggg
ggcagttaa
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